RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 PRSS38A1L453 326 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 SCDO00767 359 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 HCRTR2O43614 444 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 RD3LP0DJH9 198 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 RPS4Y1P22090 263 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 SERPINF1P36955 418 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 PMPCAQ10713 525 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 ZNF542PQ5EBM4 170 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 TAF8Q7Z7C8 310 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 C14orf79Q96F83 325 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 C4orf45Q96LM5 186 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 ZNF587Q96SQ5 575 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 CTSFQ9UBX1 484 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 DTX4Q9Y2E6 619 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 TMED7Q9Y3B3 224 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 KIF26AQ9ULI4 1882 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 A0A1B0GV50 99 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 GPR89AB7ZAQ6 455 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 GPR89BP0CG08 455 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 SDHAP31040 664 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 LINC01590Q5TEZ4 76 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 SLC18B1Q6NT16 456 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 KCTD18Q6PI47 426 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 TCEAL3Q969E4 200 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 FBXO17Q96EF6 278 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 LRFN5Q96NI6 719 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 KIR3DX1Q9H7L2 352 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 HEATR5AQ86XA9 2040 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 NKX2-2O95096 273 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 ITGA3P26006 1051 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 RFC3P40938 356 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 TMEM200AQ86VY9 491 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 OR51A2Q8NGJ7 313 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 TMEM41AQ96HV5 264 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 LPAR4Q99677 370 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 UTP23Q9BRU9 249 aaKnown RBP11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 SLC19A3Q9BZV2 496 aa11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 ESRP2Q9H6T0 727 aaKnown RBP11.6□□□□□ -0.55
TRAPPC9-208ENST00000520857 CLDN4O14493 209 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 PMP2P02689 132 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 ZNF823P16415 610 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 PSMB6P28072 239 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 IGFALSP35858 605 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 INPP5JQ15735 1006 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 GFOD2Q3B7J2 385 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 LPCAT3Q6P1A2 487 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 MDGA2Q7Z553 956 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 RXFP4Q8TDU9 374 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 GPX8Q8TED1 209 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 LHX6Q9UPM6 363 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 POLR1DQ9Y2S0 133 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 EMC9Q9Y3B6 208 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 COL4A3Q01955 1670 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 MED6O75586 246 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 ACTL6AO96019 429 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 CD80P33681 288 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 PPT1P50897 306 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 SRSF3P84103 164 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 FAM78AQ5JUQ0 283 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 LYG2Q86SG7 212 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 FJX1Q86VR8 437 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 PRSS58Q8IYP2 241 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 SLC43A2Q8N370 569 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 NUBPLQ8TB37 319 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 OR1E3Q8WZA6 343 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 OR8D2Q9GZM6 311 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 PNO1Q9NRX1 252 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 PRR13Q9NZ81 148 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 RPH3AQ9Y2J0 694 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 ARHGEF17Q96PE2 2063 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 KIF26BQ2KJY2 2108 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 MKI67P46013 3256 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 EFCAB7A8K855 629 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 ITGB2P05107 769 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 SNRNP70P08621 437 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 ALOX5APP20292 161 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 HRH1P35367 487 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 PLAURQ03405 335 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 KIR2DS3Q14952 304 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 HFEQ30201 348 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 TMEM31Q5JXX7 168 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 UQCC3Q6UW78 93 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 TMEM229BQ8NBD8 167 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 SMIM3Q9BZL3 60 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 PRTFDC1Q9NRG1 225 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 EPHA6Q9UF33 1036 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 B9D1Q9UPM9 204 aa11.59□□□□□ -0.55
TRAPPC9-208ENST00000520857 CD1AP06126 327 aa11.58□□□□□ -0.55
TRAPPC9-208ENST00000520857 TACR3P29371 465 aa11.58□□□□□ -0.55
TRAPPC9-208ENST00000520857 ARFRP1Q13795 201 aa11.58□□□□□ -0.55
TRAPPC9-208ENST00000520857 MEF2DQ14814 521 aa11.58□□□□□ -0.55
TRAPPC9-208ENST00000520857 EBPQ15125 230 aaKnown RBP11.58□□□□□ -0.55
TRAPPC9-208ENST00000520857 TMEM225Q6GV28 225 aa11.58□□□□□ -0.55
TRAPPC9-208ENST00000520857 CBLN3Q6UW01 205 aa11.58□□□□□ -0.55
TRAPPC9-208ENST00000520857 ADGRE4PQ86SQ3 457 aa11.58□□□□□ -0.55
TRAPPC9-208ENST00000520857 ETFBKMTQ8IXQ9 262 aa11.58□□□□□ -0.55
TRAPPC9-208ENST00000520857 KDM8Q8N371 416 aa11.58□□□□□ -0.55
TRAPPC9-208ENST00000520857 KTI12Q96EK9 354 aaPredicted RBP11.58□□□□□ -0.55
TRAPPC9-208ENST00000520857 CREBZFQ9NS37 354 aa11.58□□□□□ -0.55
TRAPPC9-208ENST00000520857 RAB19A4D1S5 217 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms