RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 TBL1XR1Q9BZK7 514 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 STRADBQ9C0K7 418 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 WDR54Q9H977 334 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 OPN4Q9UHM6 478 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 FER1L5A0AVI2 2057 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 F5H5P2 479 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 ATXN8OSP0DMR3 200 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 PTNP21246 168 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 MAP2K6P52564 334 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 RPS4XP62701 263 aaKnown RBP16.49■□□□□ 0.23
SDC2-202ENST00000518385 FGL1Q08830 312 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 ZNF273Q14593 569 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 LINC00303Q3SY05 128 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 ZNF684Q5T5D7 378 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 TMEM205Q6UW68 189 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 GSG1LQ6UXU4 331 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 SLC16A9Q7RTY1 509 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 ZNF227Q86WZ6 799 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 DND1Q8IYX4 353 aaKnown RBP16.49■□□□□ 0.23
SDC2-202ENST00000518385 CYB561A3Q8NBI2 242 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 OR5M9Q8NGP3 310 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 ZNF563Q8TA94 476 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 SLC39A1Q9NY26 324 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 OR5V1Q9UGF6 321 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 WDR87Q6ZQQ6 2873 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 PCNX2A6NKB5 2137 aa16.49■□□□□ 0.23
SDC2-202ENST00000518385 A0A0D9SG52 128 aa16.48■□□□□ 0.23
SDC2-202ENST00000518385 PROB1E7EW31 1015 aa16.48■□□□□ 0.23
SDC2-202ENST00000518385 PIN1P1O15428 100 aa16.48■□□□□ 0.23
SDC2-202ENST00000518385 FADS1O60427 444 aa16.48■□□□□ 0.23
SDC2-202ENST00000518385 CLUP10909 449 aa16.48■□□□□ 0.23
SDC2-202ENST00000518385 HIST1H1CP16403 213 aaKnown RBP16.48■□□□□ 0.23
SDC2-202ENST00000518385 SLC26A5P58743 744 aa16.48■□□□□ 0.23
SDC2-202ENST00000518385 CBFBQ13951 182 aa16.48■□□□□ 0.23
SDC2-202ENST00000518385 LPCAT3Q6P1A2 487 aa16.48■□□□□ 0.23
SDC2-202ENST00000518385 CBLN3Q6UW01 205 aa16.48■□□□□ 0.23
SDC2-202ENST00000518385 GATSQ8NAP1 163 aa16.48■□□□□ 0.23
SDC2-202ENST00000518385 LPAR4Q99677 370 aa16.48■□□□□ 0.23
SDC2-202ENST00000518385 GFI1Q99684 422 aa16.48■□□□□ 0.23
SDC2-202ENST00000518385 SEC22CQ9BRL7 303 aa16.48■□□□□ 0.23
SDC2-202ENST00000518385 FLVCR2Q9UPI3 526 aa16.48■□□□□ 0.23
SDC2-202ENST00000518385 IGKV1D-42A0A075B6H8 117 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 A0A0B4J203 849 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 OIP5O43482 229 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 TOXO94900 526 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 MT-CO3P00414 261 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 SPI1P17947 270 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 NAT1P18440 290 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 CCR4P51679 360 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 ZNF117Q03924 483 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 EMC4Q5J8M3 183 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 HES5Q5TA89 166 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 STAC2Q6ZMT1 411 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 ESPNLQ6ZVH7 1005 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 CPEB2Q7Z5Q1 589 aaKnown RBP16.47■□□□□ 0.23
SDC2-202ENST00000518385 CCDC36Q8IYA8 594 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 PRR22Q8IZ63 422 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 APCDD1LQ8NCL9 501 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 NPEPL1Q8NDH3 523 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 OR2AK2Q8NG84 335 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 ARSGQ96EG1 525 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 LIN37Q96GY3 246 aaPredicted RBP16.47■□□□□ 0.23
SDC2-202ENST00000518385 CHIAQ9BZP6 476 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 NRSN2Q9GZP1 204 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 HIF3AQ9Y2N7 669 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 LOXL2Q9Y4K0 774 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 IER3IP1Q9Y5U9 82 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 ACOD1A6NK06 481 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 HCRTR2O43614 444 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 PRKNO60260 465 aaPredicted RBP16.47■□□□□ 0.23
SDC2-202ENST00000518385 AKAIN1P0CW23 69 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 CDK2P24941 298 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 ALKBH1Q13686 389 aaKnown RBP16.47■□□□□ 0.23
SDC2-202ENST00000518385 ZNF74Q16587 644 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 MRPL14Q6P1L8 145 aaKnown RBP16.47■□□□□ 0.23
SDC2-202ENST00000518385 C5orf46Q6UWT4 87 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 SDR9C7Q8NEX9 313 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 OR4K13Q8NH42 304 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 GPR148Q8TDV2 347 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 LINC00052Q96N35 136 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 SLCO5A1Q9H2Y9 848 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 RYDENQ9NUL5 291 aaKnown RBP16.47■□□□□ 0.23
SDC2-202ENST00000518385 ANKRD10Q9NXR5 420 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 TMEM14AQ9Y6G1 99 aa16.47■□□□□ 0.23
SDC2-202ENST00000518385 TRBV5-7A0A0A0MS05 114 aa16.46■□□□□ 0.23
SDC2-202ENST00000518385 CDC14CA4D256 554 aa16.46■□□□□ 0.23
SDC2-202ENST00000518385 TSPAN4O14817 238 aa16.46■□□□□ 0.23
SDC2-202ENST00000518385 PMS2P2O95744 297 aa16.46■□□□□ 0.23
SDC2-202ENST00000518385 KLK3P07288 261 aaPredicted RBP16.46■□□□□ 0.23
SDC2-202ENST00000518385 GP1BBP13224 206 aa16.46■□□□□ 0.23
SDC2-202ENST00000518385 MGMTP16455 207 aa16.46■□□□□ 0.23
SDC2-202ENST00000518385 ZNF28P17035 718 aa16.46■□□□□ 0.23
SDC2-202ENST00000518385 TACR3P29371 465 aa16.46■□□□□ 0.23
SDC2-202ENST00000518385 ACTBP60709 375 aa16.46■□□□□ 0.23
SDC2-202ENST00000518385 ACTG1P63261 375 aa16.46■□□□□ 0.23
SDC2-202ENST00000518385 ANKRD16Q6P6B7 361 aa16.46■□□□□ 0.23
SDC2-202ENST00000518385 PAPD4Q6PIY7 484 aaKnown RBP16.46■□□□□ 0.23
SDC2-202ENST00000518385 RAB11FIP2Q7L804 512 aa16.46■□□□□ 0.23
SDC2-202ENST00000518385 MARCH3Q86UD3 253 aa16.46■□□□□ 0.23
SDC2-202ENST00000518385 IZUMO1Q8IYV9 350 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms