RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 MMP28Q9H239 520 aa23.64■■□□□ 1.37
COL13A1-210ENST00000517713 FBXL3Q9UKT7 428 aa23.64■■□□□ 1.37
COL13A1-210ENST00000517713 TERTO14746 1132 aaKnown RBP23.63■■□□□ 1.37
COL13A1-210ENST00000517713 EIF1BO60739 113 aaKnown RBP23.63■■□□□ 1.37
COL13A1-210ENST00000517713 SRD5A2P31213 254 aa23.63■■□□□ 1.37
COL13A1-210ENST00000517713 ENKURQ8TC29 256 aa23.63■■□□□ 1.37
COL13A1-210ENST00000517713 RFT1Q96AA3 541 aa23.63■■□□□ 1.37
COL13A1-210ENST00000517713 LIN7BQ9HAP6 207 aa23.63■■□□□ 1.37
COL13A1-210ENST00000517713 EMC9Q9Y3B6 208 aa23.63■■□□□ 1.37
COL13A1-210ENST00000517713 RAD1O60671 282 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 MAS1P04201 325 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 NR4A2P43354 598 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 KIR2DL3P43628 341 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 CYB561P49447 251 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 GPR85P60893 370 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 ZNF57Q68EA5 555 aaPredicted RBP23.62■■□□□ 1.37
COL13A1-210ENST00000517713 SLC25A47Q6Q0C1 308 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 SUMF1Q8NBK3 374 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 RNF133Q8WVZ7 376 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 MRI1Q9BV20 369 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 CENPMQ9NSP4 180 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 CYB5R1Q9UHQ9 305 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 MRPS18BQ9Y676 258 aaKnown RBP23.62■■□□□ 1.37
COL13A1-210ENST00000517713 LYRM1O43325 122 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 UBL3O95164 117 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 H2BFMP0C1H6 154 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 CSNK2A1P68400 391 aaPredicted RBP23.62■■□□□ 1.37
COL13A1-210ENST00000517713 PITPNAQ00169 270 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 ZNF227Q86WZ6 799 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 HIST2H2ABQ8IUE6 130 aaPredicted RBP23.62■■□□□ 1.37
COL13A1-210ENST00000517713 CHAC2Q8WUX2 184 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 NAA11Q9BSU3 229 aaPredicted RBP23.62■■□□□ 1.37
COL13A1-210ENST00000517713 SEC61A2Q9H9S3 476 aa23.62■■□□□ 1.37
COL13A1-210ENST00000517713 RBFOX1Q9NWB1 397 aaKnown RBP23.62■■□□□ 1.37
COL13A1-210ENST00000517713 ANXA2P2A6NMY6 339 aa23.61■■□□□ 1.37
COL13A1-210ENST00000517713 ANXA2P07355 339 aaKnown RBP23.61■■□□□ 1.37
COL13A1-210ENST00000517713 CLDN17P56750 224 aa23.61■■□□□ 1.37
COL13A1-210ENST00000517713 HIST3H3Q16695 136 aa23.61■■□□□ 1.37
COL13A1-210ENST00000517713 LRFN4Q6PJG9 635 aa23.61■■□□□ 1.37
COL13A1-210ENST00000517713 BAIAP2L2Q6UXY1 529 aa23.61■■□□□ 1.37
COL13A1-210ENST00000517713 ESPNLQ6ZVH7 1005 aa23.61■■□□□ 1.37
COL13A1-210ENST00000517713 UBQLNLQ8IYU4 475 aa23.61■■□□□ 1.37
COL13A1-210ENST00000517713 CMTM4Q8IZR5 234 aa23.61■■□□□ 1.37
COL13A1-210ENST00000517713 ITPKCQ96DU7 683 aa23.61■■□□□ 1.37
COL13A1-210ENST00000517713 STMN3Q9NZ72 180 aa23.61■■□□□ 1.37
COL13A1-210ENST00000517713 CAMK2AQ9UQM7 478 aa23.61■■□□□ 1.37
COL13A1-210ENST00000517713 LOC101059948A0A1B0GTJ6 334 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 GJE1A6NN92 205 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 TFECO14948 347 aaPredicted RBP23.6■■□□□ 1.37
COL13A1-210ENST00000517713 TLX3O43711 291 aaPredicted RBP23.6■■□□□ 1.37
COL13A1-210ENST00000517713 LANCL1O43813 399 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 TNFSF15O95150 251 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 CALCBP10092 127 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 CLDN12P56749 244 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 OC90Q02509 493 aaPredicted RBP23.6■■□□□ 1.37
COL13A1-210ENST00000517713 MFAP5Q13361 173 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 TRIP6Q15654 476 aaKnown RBP23.6■■□□□ 1.37
COL13A1-210ENST00000517713 AGAP6Q5VW22 663 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 FCRLAQ7L513 359 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 DNAAF1Q8NEP3 725 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 TRIM63Q969Q1 353 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 SLAMF6Q96DU3 332 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 ZC3HAV1LQ96H79 300 aaKnown RBP23.6■■□□□ 1.37
COL13A1-210ENST00000517713 AGAP4Q96P64 663 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 OR52A1Q9UKL2 312 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 DHDHQ9UQ10 334 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 A0A0J9YW62 118 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 EIF1AYO14602 144 aaKnown RBP23.6■■□□□ 1.37
COL13A1-210ENST00000517713 EEF1E1O43324 174 aaKnown RBP23.6■■□□□ 1.37
COL13A1-210ENST00000517713 QDPRP09417 244 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 B3GALT5-AS1P59052 145 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 JMJD6Q6NYC1 403 aaPredicted RBP23.6■■□□□ 1.37
COL13A1-210ENST00000517713 C1orf198Q9H425 327 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 G6PC2Q9NQR9 355 aa23.6■■□□□ 1.37
COL13A1-210ENST00000517713 MRPS7Q9Y2R9 242 aaKnown RBP23.6■■□□□ 1.37
COL13A1-210ENST00000517713 IGHV3-15A0A0B4J1V0 119 aa23.59■■□□□ 1.37
COL13A1-210ENST00000517713 TMEM269A0A1B0GVZ9 245 aa23.59■■□□□ 1.37
COL13A1-210ENST00000517713 TNFSF11O14788 317 aa23.59■■□□□ 1.37
COL13A1-210ENST00000517713 VAMP5O95183 116 aa23.59■■□□□ 1.37
COL13A1-210ENST00000517713 EIF1AXP47813 144 aaKnown RBP23.59■■□□□ 1.37
COL13A1-210ENST00000517713 YRDCQ86U90 279 aaKnown RBP23.59■■□□□ 1.37
COL13A1-210ENST00000517713 AKAP14Q86UN6 197 aa23.59■■□□□ 1.37
COL13A1-210ENST00000517713 TMPRSS12Q86WS5 348 aa23.59■■□□□ 1.37
COL13A1-210ENST00000517713 OR14L1PQ8NHC6 308 aa23.59■■□□□ 1.37
COL13A1-210ENST00000517713 OR5V1Q9UGF6 321 aa23.59■■□□□ 1.37
COL13A1-210ENST00000517713 CDAP32320 146 aa23.59■■□□□ 1.37
COL13A1-210ENST00000517713 CREB3L2Q70SY1 520 aa23.59■■□□□ 1.37
COL13A1-210ENST00000517713 ASB5Q8WWX0 329 aa23.59■■□□□ 1.37
COL13A1-210ENST00000517713 UCN2Q96RP3 112 aa23.59■■□□□ 1.37
COL13A1-210ENST00000517713 EMC7Q9NPA0 242 aa23.59■■□□□ 1.37
COL13A1-210ENST00000517713 DEPPQ9NTK1 212 aa23.59■■□□□ 1.37
COL13A1-210ENST00000517713 LRRC3CA6NJW4 275 aa23.58■■□□□ 1.37
COL13A1-210ENST00000517713 MMP15P51511 669 aa23.58■■□□□ 1.37
COL13A1-210ENST00000517713 ASB18Q6ZVZ8 466 aa23.58■■□□□ 1.37
COL13A1-210ENST00000517713 SLC25A38Q96DW6 304 aa23.58■■□□□ 1.37
COL13A1-210ENST00000517713 ZFP3Q96NJ6 502 aa23.58■■□□□ 1.37
COL13A1-210ENST00000517713 NPAP1Q9NZP6 1156 aa23.58■■□□□ 1.37
COL13A1-210ENST00000517713 CACNA1CQ13936 2221 aa23.58■■□□□ 1.37
COL13A1-210ENST00000517713 F10P00742 488 aa23.57■■□□□ 1.36
COL13A1-210ENST00000517713 ADRB1P08588 477 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms