RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 OR13C5Q8NGS8 318 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 GAL3ST3Q96A11 431 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 CACYBPQ9HB71 228 aaKnown RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 TCF7L1Q9HCS4 588 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 CNIH4Q9P003 139 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 GPN3Q9UHW5 284 aaPredicted RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 TCFL5Q9UL49 500 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 SPACA6W5XKT8 324 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 A0A0C4DFX4 3053 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 KIAA1549Q9HCM3 1950 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 A0A1B0GX78 115 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 FOXI3A8MTJ6 420 aaPredicted RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 HSBP1L1C9JCN9 74 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 PDCD5O14737 125 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 CDC123O75794 336 aaPredicted RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 TNFSF15O95150 251 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 NSA2O95478 260 aaKnown RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 IFNA4P05014 189 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 ALDOBP05062 364 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 RAB3BP20337 219 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 CNR1P21554 472 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 PPP2R1BP30154 601 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 ACAA2P42765 397 aaKnown RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 MEOX2P50222 304 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 SRSF3P84103 164 aaKnown RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 SCRN3Q0VDG4 424 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 DDX39BQ13838 428 aaKnown RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 ADIPOQQ15848 244 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 SPDYE7PQ495Y7 208 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 UNQ6494/PRO21346Q6UXR6 183 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 TMPRSS9Q7Z410 1059 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 STX12Q86Y82 276 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 C1QL4Q86Z23 238 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 PNLDC1Q8NA58 520 aaKnown RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 NPEPL1Q8NDH3 523 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 OR2AK2Q8NG84 335 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 OR4D10Q8NGI6 311 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 SLC35A4Q96G79 324 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 OR7D2Q96RA2 312 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 NKX6-2Q9C056 277 aaPredicted RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 MKKSQ9NPJ1 570 aaPredicted RBP6.66□□□□□ -1.34
CLIP1-205ENST00000514271 KCNG2Q9UJ96 466 aa6.66□□□□□ -1.34
CLIP1-205ENST00000514271 A0A0B4J2E0 115 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 IGHV5-51A0A0C4DH38 117 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 A0A1B0GX12 115 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 TMEM218A2RU14 115 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 ZNF891A8MT65 544 aaPredicted RBP6.65□□□□□ -1.34
CLIP1-205ENST00000514271 XRCC3O43542 346 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 LCMT2O60294 686 aaKnown RBP6.65□□□□□ -1.34
CLIP1-205ENST00000514271 FCGR3AP08637 254 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 SNRPBP14678 240 aaKnown RBP6.65□□□□□ -1.34
CLIP1-205ENST00000514271 ST6GAL1P15907 406 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 SLC48A1Q6P1K1 146 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 ANKRD16Q6P6B7 361 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 ESPNLQ6ZVH7 1005 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 USP53Q70EK8 1073 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 CXXC5Q7LFL8 322 aaKnown RBP6.65□□□□□ -1.34
CLIP1-205ENST00000514271 PRSS45Q7RTY3 260 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 DTX1Q86Y01 620 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 MISPQ8IVT2 679 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 DND1Q8IYX4 353 aaKnown RBP6.65□□□□□ -1.34
CLIP1-205ENST00000514271 TOMM5Q8N4H5 51 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 ZBTB34Q8NCN2 500 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 OR5M1Q8NGP8 315 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 LGALS14Q8TCE9 139 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 KCNE4Q8WWG9 221 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 ZNF607Q96SK3 696 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 NRTNQ99748 197 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 PCDHB16Q9NRJ7 776 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 KLK11Q9UBX7 282 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 PISDQ9UG56 409 aa6.65□□□□□ -1.34
CLIP1-205ENST00000514271 ZNF443Q9Y2A4 671 aaPredicted RBP6.65□□□□□ -1.34
CLIP1-205ENST00000514271 A0A1W2PR48 441 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 LINC00587B1AMM8 73 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 EIF3GO75821 320 aaKnown RBP eCLIP6.65□□□□□ -1.35
CLIP1-205ENST00000514271 CD14P08571 375 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 RNF212Q495C1 297 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 ACSM3Q53FZ2 586 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 DEGS2Q6QHC5 323 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 OLIG3Q7RTU3 272 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 C16orf62Q7Z3J2 963 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 TMPRSS11BQ86T26 416 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 CPOQ8IVL8 374 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 DNAAF1Q8NEP3 725 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 OR2T33Q8NG76 320 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 OR5M8Q8NGP6 311 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 ST8SIA2Q92186 375 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 GHSRQ92847 366 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 MED8Q96G25 268 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 OR6C1Q96RD1 312 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 ATP6V0BQ99437 205 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 TRIM36Q9NQ86 728 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 SPHK1Q9NYA1 384 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 KLK13Q9UKR3 277 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 GAB2Q9UQC2 676 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 MMACHCQ9Y4U1 282 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 CLDN16Q9Y5I7 305 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 TIMM10BQ9Y5J6 103 aa6.65□□□□□ -1.35
CLIP1-205ENST00000514271 IGLV3-12A0A075B6K2 115 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 H3BMH7 237 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms