RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 YIF1AO95070 293 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 SBK2P0C263 348 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 FAM157BP0CG42 384 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 FOLR1P15328 257 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 DNASE1P24855 282 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 FPR2P25090 351 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 GPR12P47775 334 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 VEGFCP49767 419 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 SNTB1Q13884 538 aaKnown RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 CRMP1Q14194 572 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 FXNQ16595 210 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 CDONQ4KMG0 1287 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 ZNF626Q68DY1 528 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 NHLRC1Q6VVB1 395 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 H2BFWTQ7Z2G1 175 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 OR8B3Q8NGG8 313 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 SECTM1Q8WVN6 248 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 PIGTQ969N2 578 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 SLAMF6Q96DU3 332 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 GRAMD2BQ96HH9 432 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 OR8B2Q96RD0 313 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 GINS3Q9BRX5 216 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 SLC25A18Q9H1K4 315 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 OCEL1Q9H607 264 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 KLK4Q9Y5K2 254 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 MEIKINA0A087WXM9 373 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 SPRY3O43610 288 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 CDK1P06493 297 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 RFC3P40938 356 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 RAB4BP61018 213 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 SNRPGP62308 76 aaKnown RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 BLOC1S1P78537 153 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 CD83Q01151 205 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 CDK5R2Q13319 367 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 NKG7Q16617 165 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 ANKRD16Q6P6B7 361 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 FAM198BQ6UWH4 519 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 BHLHA15Q7RTS1 189 aaPredicted RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 BPIFB2Q8N4F0 458 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 OR5D13Q8NGL4 314 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 TCTEX1D2Q8WW35 142 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 SLCO4A1Q96BD0 722 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 C12orf43Q96C57 262 aaKnown RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 TAAR6Q96RI8 345 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 FAM234AQ9H0X4 552 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 BCL2L10Q9HD36 194 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 SERTAD4Q9NUC0 356 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 ONECUT1Q9UBC0 465 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 RNF150Q9ULK6 438 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 OSGIN2Q9Y236 505 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 BAZ2AQ9UIF9 1905 aaKnown RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 H7C1C5 153 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 SLC22A5O76082 557 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 ZFP36L2P47974 494 aaKnown RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 KLF3P57682 345 aaPredicted RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 ZNF91Q05481 1191 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 ZNF616Q08AN1 781 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 MICBQ29980 383 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 SFRP4Q6FHJ7 346 aaPredicted RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 GGHQ92820 318 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 C3orf30Q96M34 536 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 DMRTB1Q96MA1 342 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 PHOX2BQ99453 314 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 RHNO1Q9BSD3 238 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 WDR54Q9H977 334 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 NRIP3Q9NQ35 241 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 MLXQ9UH92 298 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 TRABD2BA6NFA1 517 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 PCP4L1A6NKN8 68 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 PRKRAO75569 313 aaKnown RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 CSF3P09919 207 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 LUMP51884 338 aaPredicted RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 CLDN6P56747 220 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 RAB1AP62820 205 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 HTD2P86397 168 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 FOXF1Q12946 379 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 CEACAM16Q2WEN9 425 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 ADPRMQ3LIE5 342 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 C1orf185Q5T7R7 199 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 TMEM65Q6PI78 240 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 C1orf174Q8IYL3 243 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 D2HGDHQ8N465 521 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 C17orf78Q8N4C9 275 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 ACBD4Q8NC06 268 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 Q96M85 177 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 OR14A2Q96R54 314 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 VN1R1Q9GZP7 353 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 TCEAL2Q9H3H9 227 aaPredicted RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 C1RLQ9NZP8 487 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 CTSFQ9UBX1 484 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 WDR37Q9Y2I8 494 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 TIMM8BQ9Y5J9 83 aaPredicted RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 SLCO1B1Q9Y6L6 691 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 A0A096LPE4 126 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 A0A1W2PPZ6 126 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 FAM183AA6NL82 134 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 PRR33A8MZF0 331 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 F5H5P2 479 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 MITFO75030 526 aaPredicted RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 CLN5O75503 358 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms