RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 BBS10Q8TAM1 723 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 DYRK2Q92630 601 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 DACT3Q96B18 629 aaPredicted RBP7.63□□□□□ -1.19
NUP54-211ENST00000512151 TAMM41Q96BW9 452 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 DDIT4LQ96D03 193 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 ELMOD3Q96FG2 381 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 SLC47A1Q96FL8 570 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 MARS2Q96GW9 593 aaKnown RBP7.63□□□□□ -1.19
NUP54-211ENST00000512151 WFDC6Q9BQY6 131 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 TOR3AQ9H497 397 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 MTHFD2LQ9H903 347 aaPredicted RBP7.63□□□□□ -1.19
NUP54-211ENST00000512151 PATZ1Q9HBE1 687 aaKnown RBP7.63□□□□□ -1.19
NUP54-211ENST00000512151 NOX4Q9NPH5 578 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 POLE3Q9NRF9 147 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 DECR2Q9NUI1 292 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 HERC2O95714 4834 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 C5orf58C9J3I9 102 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 MFN2O95140 757 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 IGHV1-46P01743 117 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 IGHV4-59P01825 116 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 GPIP06744 558 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 PPIAL4GP0DN37 164 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 ETS2P15036 469 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 CD247P20963 164 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 ATP6V1B2P21281 511 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 VHLP40337 213 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 GIPRP48546 466 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 PTDSS1P48651 473 aaKnown RBP7.62□□□□□ -1.19
NUP54-211ENST00000512151 POLR2HP52434 150 aaKnown RBP7.62□□□□□ -1.19
NUP54-211ENST00000512151 GTF2A1P52655 376 aaPredicted RBP7.62□□□□□ -1.19
NUP54-211ENST00000512151 CLDN17P56750 224 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 KLF3P57682 345 aaPredicted RBP7.62□□□□□ -1.19
NUP54-211ENST00000512151 GALK2Q01415 458 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 RAB39AQ14964 217 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 DUSP7Q16829 419 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 C1orf146Q5VVC0 180 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 TMEM225Q6GV28 225 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 ZNF836Q6ZNA1 936 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 CCDC36Q8IYA8 594 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 CLIP4Q8N3C7 705 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 GPR32P1Q8NGA4 272 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 OR52P1PQ8NH57 321 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 FGFBP3Q8TAT2 258 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 SNX33Q8WV41 574 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 CNOT9Q92600 299 aaKnown RBP7.62□□□□□ -1.19
NUP54-211ENST00000512151 PMM1Q92871 262 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 DCLRE1CQ96SD1 692 aaKnown RBP7.62□□□□□ -1.19
NUP54-211ENST00000512151 DIRC2Q96SL1 478 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 OR51B6Q9H340 312 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 C16orf95Q9H693 158 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 RLIMQ9NVW2 624 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 CALML5Q9NZT1 146 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 RCE1Q9Y256 329 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 ANGPT4Q9Y264 503 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 NPTNQ9Y639 398 aa7.62□□□□□ -1.19
NUP54-211ENST00000512151 KRTAP9-6A0A140TA67 174 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 WI2-2373I1.2A0A1W2PRP0 233 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 TCRBV5S2A0A599 114 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 TMEM247A6NEH6 219 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 ZNF99A8MXY4 864 aaPredicted RBP7.61□□□□□ -1.19
NUP54-211ENST00000512151 ARPC2O15144 300 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 GSTA4O15217 222 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 SPRY3O43610 288 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 DBIP07108 87 aaKnown RBP7.61□□□□□ -1.19
NUP54-211ENST00000512151 PATE4P0C8F1 98 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 FUT4P22083 530 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 RPL15P61313 204 aaKnown RBP7.61□□□□□ -1.19
NUP54-211ENST00000512151 KCNJ10P78508 379 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 HPCAP84074 193 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 BNIP2Q12982 314 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 TRIM25Q14258 630 aaKnown RBP7.61□□□□□ -1.19
NUP54-211ENST00000512151 GNA13Q14344 377 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 SPATS1Q496A3 300 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 CYP2R1Q6VVX0 501 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 CBLL1Q75N03 491 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 SLC30A8Q8IWU4 369 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 C1orf174Q8IYL3 243 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 FAM86B1Q8N7N1 296 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 C11orf44Q8N8P7 122 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 SMYD1Q8NB12 490 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 OR4D11Q8NGI4 311 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 SYNPRQ8TBG9 265 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 CCDC124Q96CT7 223 aaKnown RBP7.61□□□□□ -1.19
NUP54-211ENST00000512151 RSRC1Q96IZ7 334 aaKnown RBP7.61□□□□□ -1.19
NUP54-211ENST00000512151 ZNF570Q96NI8 536 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 GORASP2Q9H8Y8 452 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 ADPRHL2Q9NX46 363 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 OR5V1Q9UGF6 321 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 POMPQ9Y244 141 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 ZNF443Q9Y2A4 671 aaPredicted RBP7.61□□□□□ -1.19
NUP54-211ENST00000512151 POMT1Q9Y6A1 747 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 STAB2Q8WWQ8 2551 aa7.61□□□□□ -1.19
NUP54-211ENST00000512151 IGHV2-70DA0A0C4DH43 119 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 ZNF816-ZNF321PA0A0X1KG74 233 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 ZSCAN5BA6NJL1 495 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 TPST2O60704 377 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 SERPINA1P01009 418 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 CCL2P13500 99 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 ACADSP16219 412 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 IL7RP16871 459 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms