RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 C16orf95Q9H693 158 aa9.67□□□□□ -0.86
RNF4-216ENST00000511859 MIOXQ9UGB7 285 aa9.67□□□□□ -0.86
RNF4-216ENST00000511859 IGKV1D-42A0A075B6H8 117 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 LOC100653049A0A140TA62 436 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 CEACAM18A8MTB9 384 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 CCDC22O60826 627 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 KRT34O76011 436 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 BGLAPP02818 100 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 MMP7P09237 267 aaPredicted RBP9.66□□□□□ -0.86
RNF4-216ENST00000511859 STOMP27105 288 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 CDKN2CP42773 168 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 HOXC5Q00444 222 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 HSF2Q03933 536 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 MTX3Q5HYI7 312 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 ALG10BQ5I7T1 473 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 TMEM255AQ5JRV8 349 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 SPATA46Q5T0L3 261 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 FAM91A1Q658Y4 838 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 ZNF774Q6NX45 483 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 ULK3Q6PHR2 472 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 SLC2A7Q6PXP3 512 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 BLOC1S3Q6QNY0 202 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 ZNF101Q8IZC7 436 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 CCDC197Q8NCU1 140 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 SPDL1Q96EA4 605 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 SLC25A44Q96H78 314 aaPredicted RBP9.66□□□□□ -0.86
RNF4-216ENST00000511859 SIGLEC11Q96RL6 698 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 KCNN2Q9H2S1 579 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 MSL2Q9HCI7 577 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 PPP1R3CQ9UQK1 317 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 CAPN7Q9Y6W3 813 aa9.66□□□□□ -0.86
RNF4-216ENST00000511859 A0A1B0GWA3 101 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 TMEM247A6NEH6 219 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 IFNL4K9M1U5 179 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 SURF4O15260 269 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 GPR137BO60478 399 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 SERPINI2O75830 405 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 IL6P05231 212 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 BCHEP06276 602 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 QDPRP09417 244 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 ADORA3P0DMS8 318 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 RPS2P15880 293 aaKnown RBP9.65□□□□□ -0.86
RNF4-216ENST00000511859 MRPL19P49406 292 aaKnown RBP9.65□□□□□ -0.86
RNF4-216ENST00000511859 PAGE3Q5JUK9 113 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 C6orf10Q5SRN2 563 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 GDPGP1Q6ZNW5 385 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 KLBQ86Z14 1044 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 POM121L2Q96KW2 1035 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 NUDT16L1Q9BRJ7 211 aaKnown RBP9.65□□□□□ -0.86
RNF4-216ENST00000511859 MYLK2Q9H1R3 596 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 RASSF4Q9H2L5 321 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 THUMPD1Q9NXG2 353 aaKnown RBP9.65□□□□□ -0.86
RNF4-216ENST00000511859 SELENONQ9NZV5 590 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 KIF17Q9P2E2 1029 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 IL19Q9UHD0 177 aa9.65□□□□□ -0.86
RNF4-216ENST00000511859 TMEM178BH3BS89 294 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 DCTN3O75935 186 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 OR6A2O95222 327 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 ANP32DO95626 131 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 MT-ATP6P00846 226 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 FUT4P22083 530 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 RBMXP38159 391 aaKnown RBP9.64□□□□□ -0.87
RNF4-216ENST00000511859 WNT5AP41221 380 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 CRATP43155 626 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 ZNF84P51523 738 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 FGF12P61328 243 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 GTDC1Q4AE62 458 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 PABPC1L2AQ5JQF8 200 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 SLC27A4Q6P1M0 643 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 Q6ZSV7 163 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 SLC35D2Q76EJ3 337 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 PTOV1Q86YD1 416 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 LRRC18Q8N456 261 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 FITM2Q8N6M3 262 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 OR5J2Q8NH18 312 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 VANGL1Q8TAA9 524 aaPredicted RBP9.64□□□□□ -0.87
RNF4-216ENST00000511859 GATAD2BQ8WXI9 593 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 NEIL1Q96FI4 390 aaPredicted RBP9.64□□□□□ -0.87
RNF4-216ENST00000511859 ITCHQ96J02 903 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 MOGAT1Q96PD6 335 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 ELOVL3Q9HB03 270 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 TMEM165Q9HC07 324 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 MAN2C1Q9NTJ4 1040 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 ACOXLQ9NUZ1 547 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 NECAP2Q9NVZ3 263 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 SLAMF8Q9P0V8 285 aa9.64□□□□□ -0.87
RNF4-216ENST00000511859 C5orf49A4QMS7 147 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 C11orf98E9PRG8 122 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 H0YL77 283 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 P2RY10O00398 339 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 FBP2O00757 339 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 RFXANKO14593 260 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 ANGPT2O15123 496 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 GPR37O15354 613 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 TIMM8AO60220 97 aaPredicted RBP9.63□□□□□ -0.87
RNF4-216ENST00000511859 ICMTO60725 284 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 TSPAN9O75954 239 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 FSTL3O95633 263 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 PGA4P0DJD7 388 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 PGA3P0DJD8 388 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms