RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 PTHP01270 115 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 BMP4P12644 408 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 STOMP27105 288 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 APLNRP35414 380 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 NUDT6P53370 316 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 ERVS71-1P61550 626 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.04□□□□□ -0.48
DDX41-212ENST00000511040 EFNB3Q15768 340 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 RASSF6Q6ZTQ3 369 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 LRP11Q86VZ4 500 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 OR6V1Q8N148 313 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 ZCCHC24Q8N2G6 241 aaKnown RBP12.04□□□□□ -0.48
DDX41-212ENST00000511040 ICA1LQ8NDH6 482 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 OR1J2Q8NGS2 313 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 OR4Q3Q8NH05 313 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 C11orf40Q8WZ69 217 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 SORCS2Q96PQ0 1159 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 FEVQ99581 238 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 NIPSNAP1Q9BPW8 284 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 BDH2Q9BUT1 245 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 TSSK6Q9BXA6 273 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 MRPL37Q9BZE1 423 aaKnown RBP12.04□□□□□ -0.48
DDX41-212ENST00000511040 LRMDAQ9H2I8 198 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 BARX1Q9HBU1 254 aaPredicted RBP12.04□□□□□ -0.48
DDX41-212ENST00000511040 RPRD1BQ9NQG5 326 aaKnown RBP12.04□□□□□ -0.48
DDX41-212ENST00000511040 ARMC1Q9NVT9 282 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 PDP1Q9P0J1 537 aaPredicted RBP12.04□□□□□ -0.48
DDX41-212ENST00000511040 B9D1Q9UPM9 204 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 TIMM10BQ9Y5J6 103 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 RTTNQ86VV8 2226 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 LOC100509620A0A075B734 347 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 IGLV1-36A0A0B4J1U3 117 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 C5orf49A4QMS7 147 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 OR6C68A6NDL8 312 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 BHLHE40O14503 412 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 IDH3BO43837 385 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 E2F6O75461 281 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 TIPRLO75663 272 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 INHBBP09529 407 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 GLRXP35754 106 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 GDI2P50395 445 aaKnown RBP12.03□□□□□ -0.48
DDX41-212ENST00000511040 PCBD1P61457 104 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 MEP1BQ16820 701 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 C1orf146Q5VVC0 180 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 RPL13AP3Q6NVV1 102 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 CYB561A3Q8NBI2 242 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 MAPK1IP1LQ8NDC0 245 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 MRPL24Q96A35 216 aaKnown RBP12.03□□□□□ -0.48
DDX41-212ENST00000511040 C18orf12Q96KH6 178 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 POM121L2Q96KW2 1035 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 DOK1Q99704 481 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 DGCR6LQ9BY27 220 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 C1orf198Q9H425 327 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 DYNLRB1Q9NP97 96 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 IL20Q9NYY1 176 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 MYEF2Q9P2K5 600 aaKnown RBP12.03□□□□□ -0.48
DDX41-212ENST00000511040 POLR1DQ9Y2S0 133 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 ACANP16112 2415 aa12.03□□□□□ -0.48
DDX41-212ENST00000511040 ZNF469Q96JG9 3925 aaPredicted RBP12.03□□□□□ -0.48
DDX41-212ENST00000511040 FLNAP21333 2647 aaKnown RBP12.02□□□□□ -0.49
DDX41-212ENST00000511040 RNF223E7ERA6 249 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 TP53P04637 393 aaPredicted RBP12.02□□□□□ -0.49
DDX41-212ENST00000511040 LCKP06239 509 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 ADRA2AP08913 450 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 GAAP10253 952 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 GSTM3P21266 225 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 PRKACGP22612 351 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 CRABP1P29762 137 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 PYCR1P32322 319 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 WNT5AP41221 380 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 EFNA4P52798 201 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 UCP2P55851 309 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 MAD2L1BPQ15013 274 aaPredicted RBP12.02□□□□□ -0.49
DDX41-212ENST00000511040 ALKBH6Q3KRA9 238 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 SPATA46Q5T0L3 261 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 RGS7BPQ6MZT1 257 aaPredicted RBP12.02□□□□□ -0.49
DDX41-212ENST00000511040 DNM1P34Q6PK57 102 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 Q71RC1 249 aaPredicted RBP12.02□□□□□ -0.49
DDX41-212ENST00000511040 IQCF1Q8N6M8 205 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 ZNF525Q8N782 197 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 PAPD5Q8NDF8 572 aaKnown RBP12.02□□□□□ -0.49
DDX41-212ENST00000511040 NPEPL1Q8NDH3 523 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 COX4I2Q96KJ9 171 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 YY1AP1Q9H869 796 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 ASH2LQ9UBL3 628 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 DNAJB9Q9UBS3 223 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 DUSP13Q9UII6 198 aa12.02□□□□□ -0.49
DDX41-212ENST00000511040 A0A1W2PPW3 197 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 DOK2O60496 412 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 SNAP29O95721 258 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 CLPTM1O96005 669 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 FOSL1P15407 271 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 POU1F1P28069 291 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 ALDH3B1P43353 468 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 HTR5AP47898 357 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 PPOXP50336 477 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 RPS23P62266 143 aaKnown RBP12.01□□□□□ -0.49
DDX41-212ENST00000511040 SCRN3Q0VDG4 424 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 CCNIQ14094 377 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 CARTPTQ16568 116 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms