RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, human

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-231	ENST00000510245	TCAIM	Q8N3R3	496 aa		6.09	□□□□□ -1.43
CAST-231	ENST00000510245	OR9A2	Q8NGT5	310 aa		6.09	□□□□□ -1.43
CAST-231	ENST00000510245	OR2T6	Q8NHC8	308 aa		6.09	□□□□□ -1.43
CAST-231	ENST00000510245	LRRC39	Q96DD0	335 aa		6.09	□□□□□ -1.43
CAST-231	ENST00000510245	EGLN2	Q96KS0	407 aa		6.09	□□□□□ -1.43
CAST-231	ENST00000510245	ABHD1	Q96SE0	405 aa		6.09	□□□□□ -1.43
CAST-231	ENST00000510245	KLHDC3	Q9BQ90	382 aa		6.09	□□□□□ -1.43
CAST-231	ENST00000510245	RHOXF2	Q9BQY4	288 aa		6.09	□□□□□ -1.43
CAST-231	ENST00000510245	TMEM79	Q9BSE2	394 aa		6.09	□□□□□ -1.43
CAST-231	ENST00000510245	TRIM15	Q9C019	465 aa		6.09	□□□□□ -1.43
CAST-231	ENST00000510245	SEBOX	Q9HB31	216 aa	Predicted RBP	6.09	□□□□□ -1.43
CAST-231	ENST00000510245	ZMAT5	Q9UDW3	170 aa	Known RBP	6.09	□□□□□ -1.43
CAST-231	ENST00000510245	SLC9A8	Q9Y2E8	581 aa		6.09	□□□□□ -1.43
CAST-231	ENST00000510245	CSMD3	Q7Z407	3707 aa		6.09	□□□□□ -1.43
CAST-231	ENST00000510245	IGHV2-70D	A0A0C4DH43	119 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	ZNF587B	E7ETH6	402 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	STK16	O75716	305 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	H6PD	O95479	791 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	OXSR1	O95747	527 aa	Predicted RBP	6.08	□□□□□ -1.44
CAST-231	ENST00000510245	CD28	P10747	220 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	CBR1	P16152	277 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	TMEM11	P17152	192 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	STIP1	P31948	543 aa	Known RBP	6.08	□□□□□ -1.44
CAST-231	ENST00000510245	ARR3	P36575	388 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	RPL3	P39023	403 aa	Known RBP	6.08	□□□□□ -1.44
CAST-231	ENST00000510245	FGF12	P61328	243 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	BASP1	P80723	227 aa	Known RBP	6.08	□□□□□ -1.44
CAST-231	ENST00000510245	ZBED6	P86452	979 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	GALK2	Q01415	458 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	PCLAF	Q15004	111 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	TYW3	Q6IPR3	259 aa	Known RBP	6.08	□□□□□ -1.44
CAST-231	ENST00000510245	PAQR6	Q6TCH4	344 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	ADAMTSL2	Q86TH1	951 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	PRUNE1	Q86TP1	453 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	MISP	Q8IVT2	679 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	ZBED8	Q8IZ13	594 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	POMGNT2	Q8NAT1	580 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	OR4C13	Q8NGP0	309 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	ESAM	Q96AP7	390 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	NEURL3	Q96EH8	262 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	CNRIP1	Q96F85	164 aa	Predicted RBP	6.08	□□□□□ -1.44
CAST-231	ENST00000510245	PDLIM5	Q96HC4	596 aa	Known RBP	6.08	□□□□□ -1.44
CAST-231	ENST00000510245	ZNF317	Q96PQ6	595 aa	Predicted RBP	6.08	□□□□□ -1.44
CAST-231	ENST00000510245	PAFAH2	Q99487	392 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	PPA2	Q9H2U2	334 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	NANOG	Q9H9S0	305 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	PATZ1	Q9HBE1	687 aa	Known RBP	6.08	□□□□□ -1.44
CAST-231	ENST00000510245	ACOXL	Q9NUZ1	547 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	MRPL15	Q9P015	296 aa	Known RBP	6.08	□□□□□ -1.44
CAST-231	ENST00000510245	TAAR3P	Q9P1P4	343 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	CES1P1	Q9UKY3	287 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245	ARHGAP32	A7KAX9	2087 aa		6.08	□□□□□ -1.44
CAST-231	ENST00000510245		H3BNX3	289 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	OGG1	O15527	345 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	SPRY3	O43610	288 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	PLOD3	O60568	738 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	KLK1	P06870	262 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	UROS	P10746	265 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	ETS1	P14921	441 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	CD1D	P15813	335 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	GLRX	P35754	106 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	CAPZA2	P47755	286 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	MAPK12	P53778	367 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	CUL3	Q13618	768 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	TSN	Q15631	228 aa	Known RBP	6.07	□□□□□ -1.44
CAST-231	ENST00000510245	TRMT5	Q32P41	509 aa	Known RBP	6.07	□□□□□ -1.44
CAST-231	ENST00000510245	HSP90AA5P	Q58FG0	334 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	CCNYL2	Q5T2Q4	361 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	TMPPE	Q6ZT21	453 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	ZC3HC1	Q86WB0	502 aa	Known RBP	6.07	□□□□□ -1.44
CAST-231	ENST00000510245	MUC20	Q8N307	709 aa	Predicted RBP	6.07	□□□□□ -1.44
CAST-231	ENST00000510245	MGARP	Q8TDB4	240 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	OIT3	Q8WWZ8	545 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	BCL2L2	Q92843	193 aa	Predicted RBP	6.07	□□□□□ -1.44
CAST-231	ENST00000510245	ZBTB9	Q96C00	473 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	THOC1	Q96FV9	657 aa	Known RBP	6.07	□□□□□ -1.44
CAST-231	ENST00000510245	GRAMD2B	Q96HH9	432 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	TXNDC15	Q96J42	360 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	HARBI1	Q96MB7	349 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	CITED2	Q99967	270 aa	Predicted RBP	6.07	□□□□□ -1.44
CAST-231	ENST00000510245	NMUR2	Q9GZQ4	415 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	LAT2	Q9GZY6	243 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	FAM234A	Q9H0X4	552 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	RBM38	Q9H0Z9	239 aa	Known RBP	6.07	□□□□□ -1.44
CAST-231	ENST00000510245	HRH4	Q9H3N8	390 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	C3orf14	Q9HBI5	128 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	PAK5	Q9P286	719 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	DNAH7	Q8WXX0	4024 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	FRAS1	Q86XX4	4008 aa		6.07	□□□□□ -1.44
CAST-231	ENST00000510245	DSPP	Q9NZW4	1301 aa		6.06	□□□□□ -1.44
CAST-231	ENST00000510245		A0A0U1RQK1	487 aa		6.06	□□□□□ -1.44
CAST-231	ENST00000510245		A0A1B0GW55	424 aa		6.06	□□□□□ -1.44
CAST-231	ENST00000510245	TAPBP	O15533	448 aa		6.06	□□□□□ -1.44
CAST-231	ENST00000510245	CLIC3	O95833	236 aa		6.06	□□□□□ -1.44
CAST-231	ENST00000510245	IGHV2-70	P01814	119 aa		6.06	□□□□□ -1.44
CAST-231	ENST00000510245	NGFR	P08138	427 aa		6.06	□□□□□ -1.44
CAST-231	ENST00000510245	CCDC175	P0C221	793 aa		6.06	□□□□□ -1.44
CAST-231	ENST00000510245	CTAGE8	P0CG41	777 aa		6.06	□□□□□ -1.44
CAST-231	ENST00000510245	DUX4L2	P0CJ85	424 aa		6.06	□□□□□ -1.44
CAST-231	ENST00000510245	DUX4L3	P0CJ86	424 aa		6.06	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms