RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 SPPL3Q8TCT6 385 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 SPPL2AQ8TCT8 520 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 HAVCR2Q8TDQ0 301 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 CLEC4CQ8WTT0 213 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 EEF1AKMT1Q8WVE0 214 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 TNFAIP8L1Q8WVP5 186 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 DNAJB3Q8WWF6 145 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 FCAMRQ8WWV6 532 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 RAB40AQ8WXH6 277 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 SORCS1Q8WY21 1168 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 C22orf15Q8WYQ4 148 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 OTUB2Q96DC9 234 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 C14orf79Q96F83 325 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 TEX37Q96LM6 180 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 APOLD1Q96LR9 279 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 MS4A4EQ96PG1 132 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 KLHL5Q96PQ7 755 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 PANX1Q96RD7 426 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 KCNA7Q96RP8 456 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 SERINC2Q96SA4 455 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 BARD1Q99728 777 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 MAP3K3Q99759 626 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 ACBD6Q9BR61 282 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 NTMT1Q9BV86 223 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 TSSK6Q9BXA6 273 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 RPF1Q9H9Y2 349 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 LMAN1LQ9HAT1 526 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 LRTM1Q9HBL6 345 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 SPACA1Q9HBV2 294 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 AMBNQ9NP70 447 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 TREM1Q9NP99 234 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 GPATCH2LQ9NWQ4 482 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 MARCH5Q9NX47 278 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 SLC25A13Q9UJS0 675 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 KCND3Q9UK17 655 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 ANGPT4Q9Y264 503 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 SLC9A8Q9Y2E8 581 aa4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 PRG3Q9Y2Y8 225 aaPredicted RBP4.09□□□□□ -1.75
PDLIM5-211ENST00000508531 TSC2P49815 1807 aa4.09□□□□□ -1.76
PDLIM5-211ENST00000508531 DOCK7Q96N67 2140 aa4.09□□□□□ -1.76
PDLIM5-211ENST00000508531 GPR179Q6PRD1 2367 aa4.09□□□□□ -1.76
PDLIM5-211ENST00000508531 TRAV1-2A0A0B4J238 106 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 SMCO3A2RU48 225 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 TBC1D3BA6NDS4 549 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 URADA6NGE7 173 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 OR2AT4A6NND4 320 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 A8MXE2 369 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 GPR89AB7ZAQ6 455 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 G3V3Q6 166 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 MS4A18H0YCH9 400 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 K7ERQ8 282 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 GABRPO00591 440 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 CITO14578 2027 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 OR7A17O14581 309 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 DVL1O14640 695 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 TAAR5O14804 337 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 DLEU1O43261 78 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 PPIHO43447 177 aaKnown RBP4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 SYT7O43581 403 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 KDELR3O43731 214 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 EIF4E2O60573 245 aaKnown RBP4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 LDB3O75112 727 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 ECI2O75521 394 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 DFFBO76075 338 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 KCNK5O95279 499 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 MOCS2O96007 188 aaPredicted RBP4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 GBAP04062 536 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 MELTFP08582 738 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 CSF1P09603 554 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 OR8U8P0C7N1 319 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 TBC1D3HP0C7X1 549 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 GPR89BP0CG08 455 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 PET100P0DJ07 73 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 OR8G3PP0DMU2 310 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 TBXA2RP21731 343 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 EPHA2P29317 976 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 CHI3L1P36222 383 aaPredicted RBP4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 NBL1P41271 181 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 MTNR1AP48039 350 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 TTPAP49638 278 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 CAV2P51636 162 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 DVL1P1P54792 670 aaPredicted RBP4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 CDH12P55289 794 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 FOXA1P55317 472 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 TAS2R19P59542 299 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 RANP62826 216 aaKnown RBP4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 REEP5Q00765 189 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 BEX3Q00994 111 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 ACVR1Q04771 509 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 AIMP2Q13155 320 aaKnown RBP4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 SERTAD2Q14140 314 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 KIAA0141Q14154 515 aaPredicted RBP4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 PTPRCAPQ14761 206 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 OR8G1Q15617 311 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 GGTA1PQ4G0N0 100 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 NKAIN1Q4KMZ8 207 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 TCEAL5Q5H9L2 206 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 SPANXN4Q5MJ08 99 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 DCAF10Q5QP82 559 aa4.08□□□□□ -1.76
PDLIM5-211ENST00000508531 AKR1C8PQ5T2L2 129 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms