RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 OR2H1Q9GZK4 316 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 ZNF696Q9H7X3 374 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 PLEK2Q9NYT0 353 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 RIMS3Q9UJD0 308 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 PURGQ9UJV8 347 aaKnown RBP17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 PPIAL4AQ9Y536 164 aa17.83■□□□□ 0.44
SQSTM1-210ENST00000506042 SVEP1Q4LDE5 3571 aa17.82■□□□□ 0.44
SQSTM1-210ENST00000506042 A0A1W2PPL8 197 aa17.82■□□□□ 0.44
SQSTM1-210ENST00000506042 NPPAP01160 153 aa17.82■□□□□ 0.44
SQSTM1-210ENST00000506042 IGHMP01871 453 aa17.82■□□□□ 0.44
SQSTM1-210ENST00000506042 MSR1P21757 451 aa17.82■□□□□ 0.44
SQSTM1-210ENST00000506042 CDAP32320 146 aa17.82■□□□□ 0.44
SQSTM1-210ENST00000506042 RPL27P61353 136 aaKnown RBP17.82■□□□□ 0.44
SQSTM1-210ENST00000506042 IL13RA1P78552 427 aa17.82■□□□□ 0.44
SQSTM1-210ENST00000506042 PSG4Q00888 419 aa17.82■□□□□ 0.44
SQSTM1-210ENST00000506042 SCRN3Q0VDG4 424 aa17.82■□□□□ 0.44
SQSTM1-210ENST00000506042 TOP3AQ13472 1001 aaPredicted RBP17.82■□□□□ 0.44
SQSTM1-210ENST00000506042 PRR31Q5SQ13 230 aa17.82■□□□□ 0.44
SQSTM1-210ENST00000506042 ARMC4Q5T2S8 1044 aa17.82■□□□□ 0.44
SQSTM1-210ENST00000506042 ZNF101Q8IZC7 436 aa17.82■□□□□ 0.44
SQSTM1-210ENST00000506042 AKR7LQ8NHP1 331 aa17.82■□□□□ 0.44
SQSTM1-210ENST00000506042 MS4A7Q9GZW8 240 aaPredicted RBP17.82■□□□□ 0.44
SQSTM1-210ENST00000506042 IL20RAQ9UHF4 553 aa17.82■□□□□ 0.44
SQSTM1-210ENST00000506042 POM121CA8CG34 1229 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 WIPF1O43516 503 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 LYPD3O95274 346 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 THY1P04216 161 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 COX5BP10606 129 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 MPV17P39210 176 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 METTL21CQ5VZV1 264 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 SLC27A4Q6P1M0 643 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 BTNL3Q6UXE8 466 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 DOK3Q7L591 496 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 ZDHHC22Q8N966 263 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 PFN4Q8NHR9 129 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 TMEM255BQ8WV15 326 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 THOC1Q96FV9 657 aaKnown RBP17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 SAMD8Q96LT4 415 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 PRSS27Q9BQR3 290 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 TMEM106BQ9NUM4 274 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 INTS9Q9NV88 658 aaKnown RBP17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 PPP1R3CQ9UQK1 317 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 HIF3AQ9Y2N7 669 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 PCDHGB1Q9Y5G3 927 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 CACNG2Q9Y698 323 aa17.81■□□□□ 0.44
SQSTM1-210ENST00000506042 ZSCAN5BA6NJL1 495 aa17.8■□□□□ 0.44
SQSTM1-210ENST00000506042 XKRYO14609 159 aa17.8■□□□□ 0.44
SQSTM1-210ENST00000506042 ZNF500O60304 480 aaPredicted RBP17.8■□□□□ 0.44
SQSTM1-210ENST00000506042 LAP3P28838 519 aa17.8■□□□□ 0.44
SQSTM1-210ENST00000506042 WNT5AP41221 380 aa17.8■□□□□ 0.44
SQSTM1-210ENST00000506042 BAMBIQ13145 260 aa17.8■□□□□ 0.44
SQSTM1-210ENST00000506042 ZNF771Q7L3S4 317 aaPredicted RBP17.8■□□□□ 0.44
SQSTM1-210ENST00000506042 OR8J3Q8NGG0 315 aa17.8■□□□□ 0.44
SQSTM1-210ENST00000506042 OR4D11Q8NGI4 311 aa17.8■□□□□ 0.44
SQSTM1-210ENST00000506042 C22orf15Q8WYQ4 148 aa17.8■□□□□ 0.44
SQSTM1-210ENST00000506042 NABP1Q96AH0 204 aa17.8■□□□□ 0.44
SQSTM1-210ENST00000506042 PLEKHA8Q96JA3 519 aa17.8■□□□□ 0.44
SQSTM1-210ENST00000506042 DCLRE1CQ96SD1 692 aaKnown RBP17.8■□□□□ 0.44
SQSTM1-210ENST00000506042 PATZ1Q9HBE1 687 aaKnown RBP17.8■□□□□ 0.44
SQSTM1-210ENST00000506042 TBCCD1Q9NVR7 557 aa17.8■□□□□ 0.44
SQSTM1-210ENST00000506042 IL19Q9UHD0 177 aa17.8■□□□□ 0.44
SQSTM1-210ENST00000506042 LRCH1Q9Y2L9 728 aa17.8■□□□□ 0.44
SQSTM1-210ENST00000506042 TANC2Q9HCD6 1990 aa17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 LOC100509620A0A075B734 347 aa17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 MDH2P40926 338 aaKnown RBP17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 BTG1P62324 171 aa17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 FMODQ06828 376 aa17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 ZNF154Q13106 437 aa17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 MAPRE2Q15555 327 aa17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 SLC25A47Q6Q0C1 308 aa17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 RFPL4BQ6ZWI9 263 aa17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 RRM2BQ7LG56 351 aa17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 NKAIN4Q8IVV8 208 aa17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 SIGLECL1Q8N7X8 197 aa17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 OR2Z1Q8NG97 314 aa17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 OR5L1Q8NGL2 311 aa17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 GEMIN6Q8WXD5 167 aaKnown RBP17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 GTF3AQ92664 365 aaKnown RBP17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 HDAC2Q92769 488 aaKnown RBP17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 BPIFA2Q96DR5 249 aa17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 ATP6V1G3Q96LB4 118 aa17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 MSL2Q9HCI7 577 aa17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 POLR3KQ9Y2Y1 108 aaPredicted RBP17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 UGT2A1Q9Y4X1 527 aa17.79■□□□□ 0.44
SQSTM1-210ENST00000506042 J3QW42 95 aa17.78■□□□□ 0.44
SQSTM1-210ENST00000506042 TMPRSS2O15393 492 aa17.78■□□□□ 0.44
SQSTM1-210ENST00000506042 AHCYL1O43865 530 aa17.78■□□□□ 0.44
SQSTM1-210ENST00000506042 FSHBP01225 129 aa17.78■□□□□ 0.44
SQSTM1-210ENST00000506042 IGHV2-70P01814 119 aa17.78■□□□□ 0.44
SQSTM1-210ENST00000506042 IFI30P13284 250 aa17.78■□□□□ 0.44
SQSTM1-210ENST00000506042 SLC9A3P48764 834 aa17.78■□□□□ 0.44
SQSTM1-210ENST00000506042 CTXN1P60606 82 aa17.78■□□□□ 0.44
SQSTM1-210ENST00000506042 GUCY1A3Q02108 690 aa17.78■□□□□ 0.44
SQSTM1-210ENST00000506042 CDK5R2Q13319 367 aa17.78■□□□□ 0.44
SQSTM1-210ENST00000506042 PCYOX1LQ8NBM8 494 aa17.78■□□□□ 0.44
SQSTM1-210ENST00000506042 MOSPD2Q8NHP6 518 aa17.78■□□□□ 0.44
SQSTM1-210ENST00000506042 KIF17Q9P2E2 1029 aa17.78■□□□□ 0.44
SQSTM1-210ENST00000506042 GRHPRQ9UBQ7 328 aa17.78■□□□□ 0.44
SQSTM1-210ENST00000506042 OPN4Q9UHM6 478 aa17.78■□□□□ 0.44
SQSTM1-210ENST00000506042 LRRC30A6NM36 301 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms