RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 C6orf136Q5SQH8 315 aa3□□□□□ -1.93
USP46-205ENST00000504078 ZNF362Q5T0B9 420 aaPredicted RBP3□□□□□ -1.93
USP46-205ENST00000504078 ZNF774Q6NX45 483 aa3□□□□□ -1.93
USP46-205ENST00000504078 C1orf94Q6P1W5 598 aa3□□□□□ -1.93
USP46-205ENST00000504078 TMEM53Q6P2H8 277 aa3□□□□□ -1.93
USP46-205ENST00000504078 Q6ZR03 302 aa3□□□□□ -1.93
USP46-205ENST00000504078 C9orf139Q6ZV77 190 aa3□□□□□ -1.93
USP46-205ENST00000504078 SLC16A14Q7RTX9 510 aa3□□□□□ -1.93
USP46-205ENST00000504078 MOGAT3Q86VF5 341 aa3□□□□□ -1.93
USP46-205ENST00000504078 RIMKLAQ8IXN7 391 aa3□□□□□ -1.93
USP46-205ENST00000504078 CMIPQ8IY22 773 aa3□□□□□ -1.93
USP46-205ENST00000504078 PEX5LQ8IYB4 626 aa3□□□□□ -1.93
USP46-205ENST00000504078 LRRC34Q8IZ02 419 aa3□□□□□ -1.93
USP46-205ENST00000504078 FITM2Q8N6M3 262 aa3□□□□□ -1.93
USP46-205ENST00000504078 BOLLQ8N9W6 283 aaKnown RBP3□□□□□ -1.93
USP46-205ENST00000504078 BHLHE23Q8NDY6 225 aa3□□□□□ -1.93
USP46-205ENST00000504078 CPEB3Q8NE35 698 aaKnown RBP3□□□□□ -1.93
USP46-205ENST00000504078 OR8B3Q8NGG8 313 aa3□□□□□ -1.93
USP46-205ENST00000504078 SVIPQ8NHG7 77 aa3□□□□□ -1.93
USP46-205ENST00000504078 MFSD8Q8NHS3 518 aa3□□□□□ -1.93
USP46-205ENST00000504078 ZNF519Q8TB69 540 aa3□□□□□ -1.93
USP46-205ENST00000504078 KLF14Q8TD94 323 aaPredicted RBP3□□□□□ -1.93
USP46-205ENST00000504078 SSMEM1Q8WWF3 244 aa3□□□□□ -1.93
USP46-205ENST00000504078 NSMAFQ92636 917 aa3□□□□□ -1.93
USP46-205ENST00000504078 SLC38A4Q969I6 547 aa3□□□□□ -1.93
USP46-205ENST00000504078 ZBTB9Q96C00 473 aa3□□□□□ -1.93
USP46-205ENST00000504078 COQ8BQ96D53 544 aa3□□□□□ -1.93
USP46-205ENST00000504078 R3HDM4Q96D70 268 aa3□□□□□ -1.93
USP46-205ENST00000504078 TEX37Q96LM6 180 aa3□□□□□ -1.93
USP46-205ENST00000504078 PPP3R2Q96LZ3 170 aa3□□□□□ -1.93
USP46-205ENST00000504078 WWC2-AS2Q96NR7 200 aa3□□□□□ -1.93
USP46-205ENST00000504078 OR2V2Q96R30 315 aa3□□□□□ -1.93
USP46-205ENST00000504078 OR5M11Q96RB7 305 aa3□□□□□ -1.93
USP46-205ENST00000504078 OR8B2Q96RD0 313 aa3□□□□□ -1.93
USP46-205ENST00000504078 ZNF347Q96SE7 839 aa3□□□□□ -1.93
USP46-205ENST00000504078 TBX15Q96SF7 602 aa3□□□□□ -1.93
USP46-205ENST00000504078 NKX3-1Q99801 234 aaPredicted RBP3□□□□□ -1.93
USP46-205ENST00000504078 TMEM246Q9BRR3 403 aa3□□□□□ -1.93
USP46-205ENST00000504078 RSRP1Q9BUV0 290 aa3□□□□□ -1.93
USP46-205ENST00000504078 EGLN1Q9GZT9 426 aa3□□□□□ -1.93
USP46-205ENST00000504078 PPA2Q9H2U2 334 aa3□□□□□ -1.93
USP46-205ENST00000504078 MOV10Q9HCE1 1003 aaKnown RBP3□□□□□ -1.93
USP46-205ENST00000504078 SMURF1Q9HCE7 757 aa3□□□□□ -1.93
USP46-205ENST00000504078 TCF7L2Q9NQB0 619 aa3□□□□□ -1.93
USP46-205ENST00000504078 SIRT7Q9NRC8 400 aa3□□□□□ -1.93
USP46-205ENST00000504078 NKIRAS2Q9NYR9 191 aa3□□□□□ -1.93
USP46-205ENST00000504078 PSMC3IPQ9P2W1 217 aaPredicted RBP3□□□□□ -1.93
USP46-205ENST00000504078 CTSZQ9UBR2 303 aa3□□□□□ -1.93
USP46-205ENST00000504078 RPS6KB2Q9UBS0 482 aa3□□□□□ -1.93
USP46-205ENST00000504078 ZNF180Q9UJW8 692 aa3□□□□□ -1.93
USP46-205ENST00000504078 LRCH1Q9Y2L9 728 aa3□□□□□ -1.93
USP46-205ENST00000504078 TMED5Q9Y3A6 229 aa3□□□□□ -1.93
USP46-205ENST00000504078 SF3B6Q9Y3B4 125 aaKnown RBP3□□□□□ -1.93
USP46-205ENST00000504078 TRAV36DV7A0A075B6V5 113 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 LOC100509620A0A075B734 347 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 PPIAL4EA0A075B759 164 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 PPIAL4CA0A0B4J2A2 164 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 CENPVL3A0A0U1RRI6 287 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 IQCMA0A1B0GVH7 501 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 A0A1B0GW55 424 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 SLC22A23A1A5C7 686 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 ANKRD61A6NGH8 418 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 DUXAA6NLW8 204 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 ZNF726A6NNF4 738 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 PPIAL4DF5H284 164 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 MS4A18H0YCH9 400 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 TMEM178BH3BS89 294 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 M0R3H8 397 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 FAAHO00519 579 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 RNASET2O00584 256 aaKnown RBP2.99□□□□□ -1.93
USP46-205ENST00000504078 TOX4O94842 621 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 VAMP5O95183 116 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 IGHV3-13P01766 116 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 SHBGP04278 402 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 DBIP07108 87 aaKnown RBP2.99□□□□□ -1.93
USP46-205ENST00000504078 QDPRP09417 244 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 DUX4L2P0CJ85 424 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 DUX4L3P0CJ86 424 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 DUX4L4P0CJ87 422 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 DUX4L5P0CJ88 424 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 DUX4L6P0CJ89 424 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 DUX4L7P0CJ90 424 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 ADORA3P0DMS8 318 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 PPIAL4FP0DN26 164 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 CD28P10747 220 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 UMPSP11172 480 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 CPA3P15088 417 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 ZNF32P17041 273 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 PRPS1L1P21108 318 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 UQCRC2P22695 453 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 ALDH3A1P30838 453 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 GABRA5P31644 462 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 MSX2P35548 267 aaPredicted RBP2.99□□□□□ -1.93
USP46-205ENST00000504078 CLRN1P58418 232 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 KRTAP10-11P60412 298 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 NCALDP61601 193 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 PUDPQ08623 228 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 GNA13Q14344 377 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 HERPUD1Q15011 391 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 MS4A18Q3C1V0 323 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms