RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 PTP4A3O75365 173 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 H1F0P07305 194 aaKnown RBP10.21□□□□□ -0.77
MED28-203ENST00000503945 RHCEP18577 417 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 MSR1P21757 451 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 PRDX6P30041 224 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 DVL1P1P54792 670 aaPredicted RBP10.21□□□□□ -0.77
MED28-203ENST00000503945 CDH15P55291 814 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 FHL1Q13642 323 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 CCNIQ14094 377 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 DGCR6Q14129 220 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 TSTQ16762 297 aaKnown RBP10.21□□□□□ -0.77
MED28-203ENST00000503945 HFEQ30201 348 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 OR13C2Q8NGS9 318 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 SLC7A13Q8TCU3 470 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 YIPF5Q969M3 257 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 C4orf45Q96LM5 186 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 FAM107BQ9H098 131 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 NARFLQ9H6Q4 476 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 SPAG4Q9NPE6 437 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 KRCC1Q9NPI7 259 aaPredicted RBP10.21□□□□□ -0.77
MED28-203ENST00000503945 CYSLTR2Q9NS75 346 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 ZNF275Q9NSD4 429 aaPredicted RBP10.21□□□□□ -0.77
MED28-203ENST00000503945 DCAF13Q9NV06 445 aaKnown RBP10.21□□□□□ -0.77
MED28-203ENST00000503945 TREM2Q9NZC2 230 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 EGFL7Q9UHF1 273 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 SAMD4AQ9UPU9 718 aaKnown RBP10.21□□□□□ -0.77
MED28-203ENST00000503945 AURKCQ9UQB9 309 aa10.21□□□□□ -0.77
MED28-203ENST00000503945 IGHV1-69-2A0A0G2JMI3 117 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 PRSS37A4D1T9 235 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 CDC42EP2O14613 210 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 PRSS23O95084 383 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 NDUFB2O95178 105 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 TFP02787 698 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 ITGA2P17301 1181 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 TUBG1P23258 451 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 GPR4P46093 362 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 ZNF81P51508 661 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 SMIM11AP58511 58 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 FAM209AQ5JX71 171 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 MBNL2Q5VZF2 373 aaKnown RBP10.2□□□□□ -0.78
MED28-203ENST00000503945 GPR139Q6DWJ6 353 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 ZER1Q7Z7L7 766 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 GLCCI1Q86VQ1 547 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 FAM156AQ8NDB6 213 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 CLDND2Q8NHS1 167 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 ABHD4Q8TB40 342 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 SLC25A40Q8TBP6 338 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 KLF14Q8TD94 323 aaPredicted RBP10.2□□□□□ -0.78
MED28-203ENST00000503945 RAB1CQ92928 201 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 MARS2Q96GW9 593 aaKnown RBP10.2□□□□□ -0.78
MED28-203ENST00000503945 TIMD4Q96H15 378 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 Q96M85 177 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 OR2J1Q9GZK6 312 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 EGLN1Q9GZT9 426 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 NSRP1Q9H0G5 558 aaKnown RBP10.2□□□□□ -0.78
MED28-203ENST00000503945 RACGAP1Q9H0H5 632 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 WNT5BQ9H1J7 359 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 MYLK2Q9H1R3 596 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 RERGLQ9H628 205 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 GORASP2Q9H8Y8 452 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 TUBG2Q9NRH3 451 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 NDUFAF4Q9P032 175 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 ABCD2Q9UBJ2 740 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 METRNQ9UJH8 293 aa10.2□□□□□ -0.78
MED28-203ENST00000503945 NDRG4Q9ULP0 352 aaKnown RBP10.2□□□□□ -0.78
MED28-203ENST00000503945 SPRY3O43610 288 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 NCR1O76036 304 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 NGFP01138 241 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 WNT5AP41221 380 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 PPP1CBP62140 327 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 MVKQ03426 396 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 GLO1Q04760 184 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 FGD3Q5JSP0 725 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 SPATA46Q5T0L3 261 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 ZNF774Q6NX45 483 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 FAHD2BQ6P2I3 314 aaPredicted RBP10.19□□□□□ -0.78
MED28-203ENST00000503945 DPY19L2P2Q6ZN68 376 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 FOXL2NBQ6ZUU3 175 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 TSEN54Q7Z6J9 526 aaKnown RBP10.19□□□□□ -0.78
MED28-203ENST00000503945 PEG10Q86TG7 708 aaKnown RBP10.19□□□□□ -0.78
MED28-203ENST00000503945 ZNF101Q8IZC7 436 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 OR52J3Q8NH60 311 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 CCL17Q92583 94 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 MCUR1Q96AQ8 359 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 TMEM186Q96B77 213 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 FAHD2AQ96GK7 314 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 PYURFQ96I23 114 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 FAM46AQ96IP4 442 aaKnown RBP10.19□□□□□ -0.78
MED28-203ENST00000503945 ZNF570Q96NI8 536 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 SAP30LQ9HAJ7 183 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 POLE4Q9NR33 117 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 HIF1ANQ9NWT6 349 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 KLHL21Q9UJP4 597 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 ZDHHC8Q9ULC8 765 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 ADAM18Q9Y3Q7 739 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 GRIP1Q9Y3R0 1128 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 IER3IP1Q9Y5U9 82 aa10.19□□□□□ -0.78
MED28-203ENST00000503945 UNC119BA6NIH7 251 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 H7C1C5 153 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 WNT9BO14905 357 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms