RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 EIF2B1Q14232 305 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 CDK5R1Q15078 307 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 TSPO2Q5TGU0 170 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 LIPNQ5VXI9 398 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 SLC18B1Q6NT16 456 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 LRRN1Q6UXK5 716 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 SPATC1Q76KD6 591 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 DCXRQ7Z4W1 244 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 OR5M9Q8NGP3 310 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 OR13C5Q8NGS8 318 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 OR6N1Q8NGY5 312 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 OR52N5Q8NH56 324 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 DYNC2LI1Q8TCX1 351 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 SNX33Q8WV41 574 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 RNF133Q8WVZ7 376 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 TMEM203Q969S6 136 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 PNPLA2Q96AD5 504 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 GPR137Q96N19 417 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 MNTQ99583 582 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 DCUN1D5Q9BTE7 237 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 ZNF416Q9BWM5 594 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 ULBP2Q9BZM5 246 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 PPIL3Q9H2H8 161 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 GPR35Q9HC97 309 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 TRIM36Q9NQ86 728 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 SLC7A10Q9NS82 523 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 PAQR5Q9NXK6 330 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 LAMP5Q9UJQ1 280 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 GNG8Q9UK08 70 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 FBXL3Q9UKT7 428 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 MCTS1Q9ULC4 181 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 STUB1Q9UNE7 303 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 ZNF175Q9Y473 711 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 INTS1Q8N201 2190 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 SHANK1Q9Y566 2161 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 OR4C45A6NMZ5 311 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 GABRPO00591 440 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 GPR171O14626 319 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 PHYHO14832 338 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 SLC22A1O15245 554 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 SS18L1O75177 396 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 SULT1C4O75897 302 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 RPP14O95059 124 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 IGHV3-9P01782 118 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 YES1P07947 543 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 OPRL1P41146 370 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 KIR3DL2P43630 455 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 TGM4P49221 684 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 HIST1H3AP68431 136 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 SIRPAP78324 504 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 MRPS34P82930 218 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 GPR50Q13585 617 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 RNPS1Q15287 305 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 CEACAM16Q2WEN9 425 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 ACSF3Q4G176 576 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 WDR38Q5JTN6 314 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 FAM27D1Q5T7N8 215 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 RIPPLY2Q5TAB7 128 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 HIST2H3PS2Q5TEC6 136 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 RTL6Q6ICC9 239 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 OR7E24Q6IFN5 339 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 FDX2Q6P4F2 183 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 ARL9Q6T311 187 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 HIST2H3AQ71DI3 136 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 ZNF679Q8IYX0 411 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 ALDH16A1Q8IZ83 802 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 PRSS35Q8N3Z0 413 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 RPRMLQ8N4K4 120 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 ZNF454Q8N9F8 522 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 C9orf106Q8NAJ2 232 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 IL17RDQ8NFM7 739 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 FNDC8Q8TC99 324 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 CPT1CQ8TCG5 803 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 THEM6Q8WUY1 208 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 ASB17Q8WXJ9 295 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 PPP1R14AQ96A00 147 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 SARAFQ96BY9 339 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 INTS12Q96CB8 462 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 SMIM19Q96E16 107 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 FBXO17Q96EF6 278 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 C4orf45Q96LM5 186 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 PDCD1LG2Q9BQ51 273 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 SLX1AQ9BQ83 275 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 TTYH2Q9BSA4 534 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 TMED9Q9BVK6 235 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 LINC00470Q9BZP3 86 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 SLCO5A1Q9H2Y9 848 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 NELFAQ9H3P2 528 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 PRORYQ9H606 182 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 SEC61A2Q9H9S3 476 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 CALHM2Q9HA72 323 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 ELOVL3Q9HB03 270 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 CRLF2Q9HC73 371 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 TMEM38BQ9NVV0 291 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 TXNL4BQ9NX01 149 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 ZNF224Q9NZL3 707 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 EMC3Q9P0I2 261 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 FRRS1LQ9P0K9 344 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 ASH2LQ9UBL3 628 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 PRSS50Q9UI38 385 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms