RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 EIF1P41567 113 aaKnown RBP10.74□□□□□ -0.69
NUP54-202ENST00000502850 DUSP3P51452 185 aaPredicted RBP10.74□□□□□ -0.69
NUP54-202ENST00000502850 CCR6P51684 374 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 POU3F1Q03052 451 aaPredicted RBP10.74□□□□□ -0.69
NUP54-202ENST00000502850 SNTA1Q13424 505 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 TRA2AQ13595 282 aaKnown RBP eCLIP10.74□□□□□ -0.69
NUP54-202ENST00000502850 MS4A18Q3C1V0 323 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 TMEM244Q5VVB8 128 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 OR7E24Q6IFN5 339 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 NDUFAF7Q7L592 441 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 GLB1L2Q8IW92 636 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 SLC7A5P1Q8MH63 180 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 OR10H5Q8NGA6 315 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 OR6M1Q8NGM8 313 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 FOXRED1Q96CU9 486 aaPredicted RBP10.74□□□□□ -0.69
NUP54-202ENST00000502850 RBP7Q96R05 134 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 AMELYQ99218 206 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 SPSB2Q99619 263 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 GPN3Q9UHW5 284 aaPredicted RBP10.74□□□□□ -0.69
NUP54-202ENST00000502850 PILRBQ9UKJ0 227 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 GTF2A1LQ9UNN4 478 aa10.74□□□□□ -0.69
NUP54-202ENST00000502850 RPH3AQ9Y2J0 694 aaPredicted RBP10.74□□□□□ -0.69
NUP54-202ENST00000502850 COA3Q9Y2R0 106 aaPredicted RBP10.74□□□□□ -0.69
NUP54-202ENST00000502850 MEIKINA0A087WXM9 373 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 LY6G6EA0A0G2JKS1 128 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 SULT1C2O00338 296 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 ZNF780AO75290 641 aaPredicted RBP10.73□□□□□ -0.69
NUP54-202ENST00000502850 GPANK1O95872 356 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 ADH6P28332 368 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 RPS27P42677 84 aaKnown RBP10.73□□□□□ -0.69
NUP54-202ENST00000502850 MAGEB1P43366 347 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 DNASE1L1P49184 302 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 ACTBP60709 375 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 ACTG1P63261 375 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 LPAL2Q16609 132 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 HLA-BQ31612 363 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 PLPPR5Q32ZL2 321 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 TMEM225Q6GV28 225 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 TMPRSS9Q7Z410 1059 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.73□□□□□ -0.69
NUP54-202ENST00000502850 SERPINA12Q8IW75 414 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 FAM109AQ8N4B1 249 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 SLC38A9Q8NBW4 561 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 SPACA9Q96E40 222 aaPredicted RBP10.73□□□□□ -0.69
NUP54-202ENST00000502850 UTP23Q9BRU9 249 aaKnown RBP10.73□□□□□ -0.69
NUP54-202ENST00000502850 DEFB126Q9BYW3 111 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 PTGES2Q9H7Z7 377 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 MOB1AQ9H8S9 216 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 PLSCR3Q9NRY6 295 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 MED11Q9P086 117 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 SCP2D1Q9UJQ7 156 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 VDAC3Q9Y277 283 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 HSPB11Q9Y547 144 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 U3KQA8 63 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 ASXL3Q9C0F0 2248 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 WDR87Q6ZQQ6 2873 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 A0A087WZY1 265 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 A0A1B0GTH9 108 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 TMEM200CA6NKL6 621 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 SNRPGP15A8MWD9 76 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 H7C417 338 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 FABP7O15540 132 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 CTAG2O75638 210 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 TIAF1O95411 115 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 IL5P05113 134 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 CPN1P15169 458 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 C4BPBP20851 252 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 CSRP1P21291 193 aaKnown RBP10.73□□□□□ -0.69
NUP54-202ENST00000502850 POU3F4P49335 361 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 MECP2P51608 486 aaKnown RBP10.73□□□□□ -0.69
NUP54-202ENST00000502850 THEM4Q5T1C6 240 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 FAM69BQ5VUD6 431 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 MRPL14Q6P1L8 145 aaKnown RBP10.73□□□□□ -0.69
NUP54-202ENST00000502850 KLHL24Q6TFL4 600 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 UTS2BQ765I0 119 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.73□□□□□ -0.69
NUP54-202ENST00000502850 UEVLDQ8IX04 471 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 DNAAF1Q8NEP3 725 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 OR11H7Q8NGC8 314 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 OR51A4Q8NGJ6 313 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 OR13C3Q8NGS6 347 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 OR10AC1Q8NH08 325 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 THAP3Q8WTV1 239 aaPredicted RBP10.73□□□□□ -0.69
NUP54-202ENST00000502850 ASB5Q8WWX0 329 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 PTX4Q96A99 478 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 FAM3DQ96BQ1 224 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 ZBTB8AQ96BR9 441 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 DNAJA3Q96EY1 480 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 RADILQ96JH8 1075 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 ULBP3Q9BZM4 244 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 TMEM165Q9HC07 324 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 KLHL13Q9P2N7 655 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 MTFP1Q9UDX5 166 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 ING1Q9UK53 422 aaPredicted RBP10.73□□□□□ -0.69
NUP54-202ENST00000502850 OR52A1Q9UKL2 312 aa10.73□□□□□ -0.69
NUP54-202ENST00000502850 SDK1Q7Z5N4 2213 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 ARID1BQ8NFD5 2236 aaPredicted RBP10.72□□□□□ -0.69
NUP54-202ENST00000502850 AGRPO00253 132 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 MEN1O00255 615 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 SRSF10O75494 262 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms