RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 TMEM178BH3BS89 294 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 CHP2O43745 196 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 TYROBPO43914 113 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 PIP5K1CO60331 668 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 F13BP05160 661 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 WNT2P09544 360 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 MMP16P51512 607 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 CDK6Q00534 326 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 PSG7Q13046 419 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 STX3Q13277 289 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 CDK5R2Q13319 367 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 RUNDC3AQ59EK9 446 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 HHATQ5VTY9 493 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 SLC27A4Q6P1M0 643 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 VASH1Q7L8A9 365 aaPredicted RBP9.75□□□□□ -0.85
CDK9-205ENST00000498339 ALDH16A1Q8IZ83 802 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 GOLGA6L1Q8N7Z2 621 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 LINC01006Q8NI28 216 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 ZNF420Q8TAQ5 688 aaPredicted RBP9.75□□□□□ -0.85
CDK9-205ENST00000498339 TBC1D15Q8TC07 691 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 SSMEM1Q8WWF3 244 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 DYRK2Q92630 601 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 NEIL1Q96FI4 390 aaPredicted RBP9.75□□□□□ -0.85
CDK9-205ENST00000498339 C4orf45Q96LM5 186 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 ZNF607Q96SK3 696 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 MCHR1Q99705 422 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 SLCO1B3Q9NPD5 702 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 MAN2C1Q9NTJ4 1040 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 MIOXQ9UGB7 285 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 IL19Q9UHD0 177 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 ZNF229Q9UJW7 825 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 NBEAL2Q6ZNJ1 2754 aa9.75□□□□□ -0.85
CDK9-205ENST00000498339 TRPC5OSA6NMA1 111 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 M0R3H8 397 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 BIRC5O15392 142 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 MGRN1O60291 552 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 GPR137BO60478 399 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 FMO6PO60774 539 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 SERPINB7O75635 380 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 TRMUO75648 421 aaKnown RBP9.74□□□□□ -0.85
CDK9-205ENST00000498339 CLPXO76031 633 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 CYB5R3P00387 301 aaPredicted RBP9.74□□□□□ -0.85
CDK9-205ENST00000498339 KITP10721 976 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 ACADSP16219 412 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 PITPNBP48739 271 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 DAP3P51398 398 aaKnown RBP9.74□□□□□ -0.85
CDK9-205ENST00000498339 POLR2JP52435 117 aaKnown RBP9.74□□□□□ -0.85
CDK9-205ENST00000498339 PROK1P58294 105 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 RPL15P61313 204 aaKnown RBP9.74□□□□□ -0.85
CDK9-205ENST00000498339 MRPS34P82930 218 aaKnown RBP9.74□□□□□ -0.85
CDK9-205ENST00000498339 PSG4Q00888 419 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 PAX2Q02962 417 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 FMODQ06828 376 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 SCARB2Q14108 478 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 BEAN1Q3B7T3 259 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 ZNF774Q6NX45 483 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 ZNF613Q6PF04 617 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 SLC2A7Q6PXP3 512 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 Q6ZPA2 131 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 MSANTD1Q6ZTZ1 278 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 ARMC8Q8IUR7 673 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 ATG16L2Q8NAA4 619 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 NPEPL1Q8NDH3 523 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 OR9I1Q8NGQ6 314 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 VANGL1Q8TAA9 524 aaPredicted RBP9.74□□□□□ -0.85
CDK9-205ENST00000498339 MRAPQ8TCY5 172 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 ASB10Q8WXI3 467 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 PAIP2Q9BPZ3 127 aaKnown RBP9.74□□□□□ -0.85
CDK9-205ENST00000498339 WFDC6Q9BQY6 131 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 RSPO3Q9BXY4 272 aaPredicted RBP9.74□□□□□ -0.85
CDK9-205ENST00000498339 OR2H1Q9GZK4 316 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 PRDM13Q9H4Q3 707 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 CLN8Q9UBY8 286 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 KLHL21Q9UJP4 597 aa9.74□□□□□ -0.85
CDK9-205ENST00000498339 ENSAO43768 121 aaKnown RBP9.73□□□□□ -0.85
CDK9-205ENST00000498339 TPST2O60704 377 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 IGHV4-59P01825 116 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 VIMP08670 466 aaKnown RBP9.73□□□□□ -0.85
CDK9-205ENST00000498339 BMP2P12643 396 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 SLC6A2P23975 617 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 GUCA1AP43080 201 aaPredicted RBP9.73□□□□□ -0.85
CDK9-205ENST00000498339 BPIFB3P59826 476 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 RPL18Q07020 188 aaKnown RBP9.73□□□□□ -0.85
CDK9-205ENST00000498339 BST1Q10588 318 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 HIST3H3Q16695 136 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 C10orf128Q5T292 105 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 OR5AS1Q8N127 324 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 FITM2Q8N6M3 262 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 EIF1ADQ8N9N8 165 aaKnown RBP9.73□□□□□ -0.85
CDK9-205ENST00000498339 SMYD1Q8NB12 490 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 SCCPDHQ8NBX0 429 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 OR10AD1Q8NGE0 317 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 GATAD2BQ8WXI9 593 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 NABP1Q96AH0 204 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 MAGEB18Q96M61 343 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 TECTBQ96PL2 329 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 PAIP1Q9H074 479 aaKnown RBP9.73□□□□□ -0.85
CDK9-205ENST00000498339 WNT5BQ9H1J7 359 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 POFUT1Q9H488 388 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 GCM1Q9NP62 436 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms