RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 RBMXL1Q96E39 390 aaKnown RBP7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZNF75AQ96N20 296 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 GPR78Q96P69 363 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZNF382Q96SR6 550 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 SDF2Q99470 211 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 PAIP2Q9BPZ3 127 aaKnown RBP7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 PCGF1Q9BSM1 259 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 BCL2L14Q9BZR8 327 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 MMP28Q9H239 520 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 CDH20Q9HBT6 801 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 PAPOLBQ9NRJ5 636 aaKnown RBP7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 TMEM106BQ9NUM4 274 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 FBLN5Q9UBX5 448 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 VPREB3Q9UKI3 123 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZDHHC8Q9ULC8 765 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 USH1CQ9Y6N9 552 aa7.98□□□□□ -1.13
SMARCAL1-213ENST00000496037 KIR2DS1A0A191URI9 304 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 RBMY1BA6NDE4 496 aaKnown RBP7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 RBMY1EA6NEQ0 496 aaKnown RBP7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 CFAP73A6NFT4 308 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 CEACAM18A8MTB9 384 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 M0R3G1 203 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 SUPT7LO94864 414 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 AK1P00568 194 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 IGHV3-13P01766 116 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 SERPINA5P05154 406 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 RBMY1DP0C7P1 496 aaKnown RBP7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 B4GALT1P15291 398 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 EFNA1P20827 205 aaPredicted RBP7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 GTF2E2P29084 291 aaKnown RBP7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 ECHS1P30084 290 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 CRHR1P34998 444 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 MSX2P35548 267 aaPredicted RBP7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 HSD17B3P37058 310 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 MDH2P40926 338 aaKnown RBP7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 FRKP42685 505 aaPredicted RBP7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZMYND11Q15326 602 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 C9orf152Q5JTZ5 239 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 CDPF1Q6NVV7 123 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 C3orf62Q6ZUJ4 267 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 CYS1Q717R9 158 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 RNF130Q86XS8 419 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 KLHDC1Q8N7A1 406 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 EIF1ADQ8N9N8 165 aaKnown RBP7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 SPERTQ8NA61 448 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 SCCPDHQ8NBX0 429 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 SLC30A7Q8NEW0 376 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 SETD6Q8TBK2 473 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 GIMAP1Q8WWP7 306 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 SPSB4Q96A44 273 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 PBKQ96KB5 322 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 EGLN2Q96KS0 407 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 OR7D2Q96RA2 312 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 REEP4Q9H6H4 257 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 EXOSC3Q9NQT5 275 aaKnown RBP7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 EXTL2Q9UBQ6 330 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 MKLN1Q9UL63 735 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 POFUT2Q9Y2G5 429 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 STK38LQ9Y2H1 464 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 STARD9Q9P2P6 4700 aa7.97□□□□□ -1.13
SMARCAL1-213ENST00000496037 RNASEK-C17orf49H0YIS7 233 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 P2RY10O00398 339 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 TP73O15350 636 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 RAD51CO43502 376 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 TSC22D2O75157 780 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 TPPPO94811 219 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 ENO1P06733 434 aaKnown RBP7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 LYL1P12980 280 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 UQCRBP14927 111 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 TCP1P17987 556 aaKnown RBP7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 CPT2P23786 658 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 CXCR1P25024 350 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 SERPINB8P50452 374 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 P2RY4P51582 365 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 MXRA7P84157 204 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 GUCY2DQ02846 1103 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 CBX3Q13185 183 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 ARHGAP11BQ3KRB8 267 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 ZMAT1Q5H9K5 638 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 STEAP3Q658P3 488 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 SLC35E4Q6ICL7 350 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 RNF144BQ7Z419 303 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 IFT20Q8IY31 132 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 OR5D16Q8NGK9 328 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 ATP6V1G3Q96LB4 118 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 C1QTNF3Q9BXJ4 246 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 B3GAT2Q9NPZ5 323 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 CYSLTR2Q9NS75 346 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 KCNE5Q9UJ90 142 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 TIMM22Q9Y584 194 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 DOCK11Q5JSL3 2073 aa7.96□□□□□ -1.14
SMARCAL1-213ENST00000496037 STAB2Q8WWQ8 2551 aa7.95□□□□□ -1.14
SMARCAL1-213ENST00000496037 RNF103-CHMP3A0A140T963 221 aa7.95□□□□□ -1.14
SMARCAL1-213ENST00000496037 GMNCA6NCL1 334 aa7.95□□□□□ -1.14
SMARCAL1-213ENST00000496037 ZSCAN5BA6NJL1 495 aa7.95□□□□□ -1.14
SMARCAL1-213ENST00000496037 A8MT66 165 aa7.95□□□□□ -1.14
SMARCAL1-213ENST00000496037 ENSAO43768 121 aaKnown RBP7.95□□□□□ -1.14
SMARCAL1-213ENST00000496037 FCMRO60667 390 aa7.95□□□□□ -1.14
SMARCAL1-213ENST00000496037 TBX19O60806 448 aa7.95□□□□□ -1.14
SMARCAL1-213ENST00000496037 BCAS1O75363 584 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms