RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 GLB1L2Q8IW92 636 aa19.44■□□□□ 0.7
SNIP1-203ENST00000493916 ALDH16A1Q8IZ83 802 aa19.44■□□□□ 0.7
SNIP1-203ENST00000493916 OR9Q2Q8NGE9 314 aa19.44■□□□□ 0.7
SNIP1-203ENST00000493916 SAMD8Q96LT4 415 aa19.44■□□□□ 0.7
SNIP1-203ENST00000493916 EMC7Q9NPA0 242 aa19.44■□□□□ 0.7
SNIP1-203ENST00000493916 FZR1Q9UM11 496 aa19.44■□□□□ 0.7
SNIP1-203ENST00000493916 CR1P17927 2039 aa19.43■□□□□ 0.7
SNIP1-203ENST00000493916 LOC100509620A0A075B734 347 aa19.43■□□□□ 0.7
SNIP1-203ENST00000493916 GYG2O15488 501 aa19.43■□□□□ 0.7
SNIP1-203ENST00000493916 IDH3BO43837 385 aa19.43■□□□□ 0.7
SNIP1-203ENST00000493916 ICMTO60725 284 aa19.43■□□□□ 0.7
SNIP1-203ENST00000493916 CCNB2O95067 398 aa19.43■□□□□ 0.7
SNIP1-203ENST00000493916 RAP2AP10114 183 aa19.43■□□□□ 0.7
SNIP1-203ENST00000493916 ZNF250P15622 560 aa19.43■□□□□ 0.7
SNIP1-203ENST00000493916 HOXB4P17483 251 aaPredicted RBP19.43■□□□□ 0.7
SNIP1-203ENST00000493916 GDI2P50395 445 aaKnown RBP19.43■□□□□ 0.7
SNIP1-203ENST00000493916 LOXL1Q08397 574 aaPredicted RBP19.43■□□□□ 0.7
SNIP1-203ENST00000493916 OR2T5Q6IEZ7 315 aa19.43■□□□□ 0.7
SNIP1-203ENST00000493916 RPL13AP3Q6NVV1 102 aa19.43■□□□□ 0.7
SNIP1-203ENST00000493916 DNM1P34Q6PK57 102 aa19.43■□□□□ 0.7
SNIP1-203ENST00000493916 ZCCHC24Q8N2G6 241 aaKnown RBP19.43■□□□□ 0.7
SNIP1-203ENST00000493916 OR2T29Q8NH02 315 aa19.43■□□□□ 0.7
SNIP1-203ENST00000493916 IFT27Q9BW83 186 aa19.43■□□□□ 0.7
SNIP1-203ENST00000493916 NUAK2Q9H093 628 aa19.43■□□□□ 0.7
SNIP1-203ENST00000493916 MYEF2Q9P2K5 600 aaKnown RBP19.43■□□□□ 0.7
SNIP1-203ENST00000493916 REV1Q9UBZ9 1251 aa19.43■□□□□ 0.7
SNIP1-203ENST00000493916 CDH10Q9Y6N8 788 aa19.43■□□□□ 0.7
SNIP1-203ENST00000493916 IGLV3-9A0A075B6K5 115 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 LOC390937A0A1W2PQ73 354 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 C5orf49A4QMS7 147 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 AQP12BA6NM10 295 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 VWC2LB2RUY7 222 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 CRABP1P29762 137 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 LSM6P62312 80 aaKnown RBP19.42■□□□□ 0.7
SNIP1-203ENST00000493916 SCRN3Q0VDG4 424 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 GK3PQ14409 553 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 ZNF774Q6NX45 483 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 PGM2L1Q6PCE3 622 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 JAZF1Q86VZ6 243 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 AQP12AQ8IXF9 295 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 ADGRG5Q8IZF4 528 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 C11orf40Q8WZ69 217 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 SLC7A6OSQ96CW6 309 aaPredicted RBP19.42■□□□□ 0.7
SNIP1-203ENST00000493916 POM121Q96HA1 1249 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 PIMREGQ9BSJ6 248 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 OR51B6Q9H340 312 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 MS4A5Q9H3V2 200 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 REEP1Q9H902 201 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 VNN3Q9NY84 501 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 DUSP13Q9UII6 198 aa19.42■□□□□ 0.7
SNIP1-203ENST00000493916 COA3Q9Y2R0 106 aaPredicted RBP19.42■□□□□ 0.7
SNIP1-203ENST00000493916 SAMHD1Q9Y3Z3 626 aaKnown RBP19.42■□□□□ 0.7
SNIP1-203ENST00000493916 A0A1W2PPW3 197 aa19.41■□□□□ 0.7
SNIP1-203ENST00000493916 LCKP06239 509 aa19.41■□□□□ 0.7
SNIP1-203ENST00000493916 COX5BP10606 129 aa19.41■□□□□ 0.7
SNIP1-203ENST00000493916 HIST1H1CP16403 213 aaKnown RBP19.41■□□□□ 0.7
SNIP1-203ENST00000493916 HOXB6P17509 224 aaKnown RBP19.41■□□□□ 0.7
SNIP1-203ENST00000493916 CCNOP22674 350 aa19.41■□□□□ 0.7
SNIP1-203ENST00000493916 WNT5AP41221 380 aa19.41■□□□□ 0.7
SNIP1-203ENST00000493916 ALDH3B1P43353 468 aa19.41■□□□□ 0.7
SNIP1-203ENST00000493916 KLF3P57682 345 aaPredicted RBP19.41■□□□□ 0.7
SNIP1-203ENST00000493916 SELENOVP59797 346 aa19.41■□□□□ 0.7
SNIP1-203ENST00000493916 ERVS71-1P61550 626 aa19.41■□□□□ 0.7
SNIP1-203ENST00000493916 AQP6Q13520 282 aa19.41■□□□□ 0.7
SNIP1-203ENST00000493916 KCNMB1Q16558 191 aa19.41■□□□□ 0.7
SNIP1-203ENST00000493916 LEG1Q6P5S2 330 aa19.41■□□□□ 0.7
SNIP1-203ENST00000493916 UNQ6126/PRO20091Q6UXV3 157 aa19.41■□□□□ 0.7
SNIP1-203ENST00000493916 C1orf174Q8IYL3 243 aa19.41■□□□□ 0.7
SNIP1-203ENST00000493916 SYNPRQ8TBG9 265 aa19.41■□□□□ 0.7
SNIP1-203ENST00000493916 FOXN4Q96NZ1 517 aa19.41■□□□□ 0.7
SNIP1-203ENST00000493916 RERGLQ9H628 205 aa19.41■□□□□ 0.7
SNIP1-203ENST00000493916 EIF3KQ9UBQ5 218 aaKnown RBP19.41■□□□□ 0.7
SNIP1-203ENST00000493916 NDRG4Q9ULP0 352 aaKnown RBP19.41■□□□□ 0.7
SNIP1-203ENST00000493916 IGLV1-36A0A0B4J1U3 117 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 RENP00797 406 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 GASTP01350 101 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 GAAP10253 952 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 DAOP14920 347 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 NOS3P29474 1203 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 MAD2L1BPQ15013 274 aaPredicted RBP19.4■□□□□ 0.7
SNIP1-203ENST00000493916 MICAQ29983 383 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 RASSF6Q6ZTQ3 369 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 ZNF101Q8IZC7 436 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 AQP11Q8NBQ7 271 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 OR52L1Q8NGH7 329 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 OR1J1Q8NGS3 322 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 NMNAT3Q96T66 252 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 CHID1Q9BWS9 393 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 RACGAP1Q9H0H5 632 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 TPK1Q9H3S4 243 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 EGLN3Q9H6Z9 239 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 IL20Q9NYY1 176 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 GPR160Q9UJ42 338 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 TLN2Q9Y4G6 2542 aa19.4■□□□□ 0.7
SNIP1-203ENST00000493916 DHRS12A0PJE2 317 aa19.39■□□□□ 0.69
SNIP1-203ENST00000493916 DCTN6O00399 190 aa19.39■□□□□ 0.69
SNIP1-203ENST00000493916 CD5LO43866 347 aa19.39■□□□□ 0.69
SNIP1-203ENST00000493916 DOK2O60496 412 aa19.39■□□□□ 0.69
SNIP1-203ENST00000493916 MPZL1O95297 269 aa19.39■□□□□ 0.69
SNIP1-203ENST00000493916 TP53P04637 393 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms