RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 SYCP1Q15431 976 aa3.41□□□□□ -1.86
GTF3A-208ENST00000493903 KRTAP24-1Q3LI83 254 aa3.41□□□□□ -1.86
GTF3A-208ENST00000493903 ZC2HC1BQ5TFG8 222 aa3.41□□□□□ -1.86
GTF3A-208ENST00000493903 ASCL4Q6XD76 172 aa3.41□□□□□ -1.86
GTF3A-208ENST00000493903 SNX20Q7Z614 316 aa3.41□□□□□ -1.86
GTF3A-208ENST00000493903 SPATA24Q86W54 205 aa3.41□□□□□ -1.86
GTF3A-208ENST00000493903 WDSUB1Q8N9V3 476 aa3.41□□□□□ -1.86
GTF3A-208ENST00000493903 OR51S1Q8NGJ8 323 aa3.41□□□□□ -1.86
GTF3A-208ENST00000493903 CA5BP1Q8WTZ4 195 aa3.41□□□□□ -1.86
GTF3A-208ENST00000493903 FRAT1Q92837 279 aaPredicted RBP3.41□□□□□ -1.86
GTF3A-208ENST00000493903 DEFB129Q9H1M3 183 aa3.41□□□□□ -1.86
GTF3A-208ENST00000493903 GNB4Q9HAV0 340 aa3.41□□□□□ -1.86
GTF3A-208ENST00000493903 CSNK1G1Q9HCP0 422 aa3.41□□□□□ -1.86
GTF3A-208ENST00000493903 CD209Q9NNX6 404 aa3.41□□□□□ -1.86
GTF3A-208ENST00000493903 DMAP1Q9NPF5 467 aaPredicted RBP3.41□□□□□ -1.86
GTF3A-208ENST00000493903 TREM2Q9NZC2 230 aa3.41□□□□□ -1.86
GTF3A-208ENST00000493903 ZNF282Q9UDV7 671 aaPredicted RBP3.41□□□□□ -1.86
GTF3A-208ENST00000493903 KIF25Q9UIL4 384 aa3.41□□□□□ -1.86
GTF3A-208ENST00000493903 KLHL21Q9UJP4 597 aa3.41□□□□□ -1.86
GTF3A-208ENST00000493903 GOLT1BQ9Y3E0 138 aa3.41□□□□□ -1.86
GTF3A-208ENST00000493903 PIK3C2AO00443 1686 aa3.4□□□□□ -1.86
GTF3A-208ENST00000493903 TUBGCP6Q96RT7 1819 aa3.4□□□□□ -1.86
GTF3A-208ENST00000493903 A0A1B0GU03 582 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 ERICH2A1L162 156 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 A6NIZ1 184 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 SNAPINO95295 136 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 ETHE1O95571 254 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 YEATS4O95619 227 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 OR8U8P0C7N1 319 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 CCL2P13500 99 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 PMCHP20382 165 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 ATP6V1B2P21281 511 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 CSKP41240 450 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 BTDP43251 543 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 GPR6P46095 362 aaPredicted RBP3.4□□□□□ -1.87
GTF3A-208ENST00000493903 RAP1BP61224 184 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 STXBP1P61764 594 aaKnown RBP3.4□□□□□ -1.87
GTF3A-208ENST00000493903 PSMC5P62195 406 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 BCL2L1Q07817 233 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 CPSF1Q10570 1443 aaKnown RBP3.4□□□□□ -1.87
GTF3A-208ENST00000493903 ECH1Q13011 328 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 ATP6AP1Q15904 470 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 RPEL1Q2QD12 228 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 PRR30Q53SZ7 412 aaPredicted RBP3.4□□□□□ -1.87
GTF3A-208ENST00000493903 PAGE2BQ5JRK9 111 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 C1orf146Q5VVC0 180 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 TNS2Q63HR2 1409 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 METTL7BQ6UX53 244 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 TFAP2EQ6VUC0 442 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 SLC35D2Q76EJ3 337 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 SLC25A42Q86VD7 318 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 PRR22Q8IZ63 422 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 PUSL1Q8N0Z8 303 aaKnown RBP3.4□□□□□ -1.87
GTF3A-208ENST00000493903 C6orf223Q8N319 242 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 ARHGAP18Q8N392 663 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 PRELID2Q8N945 189 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 VN1R2Q8NFZ6 395 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 ZNF502Q8TBZ5 544 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 NEIL2Q969S2 332 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 FAM131CQ96AQ9 280 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 NRBF2Q96F24 287 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 DUS3LQ96G46 650 aaKnown RBP3.4□□□□□ -1.87
GTF3A-208ENST00000493903 C18orf12Q96KH6 178 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 RARRES2Q99969 163 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 RNF167Q9H6Y7 350 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 TREM1Q9NP99 234 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 PRSS16Q9NQE7 514 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 CALYQ9NYX4 217 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 APOBEC3BQ9UH17 382 aaKnown RBP3.4□□□□□ -1.87
GTF3A-208ENST00000493903 ZNF580Q9UK33 172 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 DDX19BQ9UMR2 479 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 MOB4Q9Y3A3 225 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 UGT2A1Q9Y4X1 527 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 KPTNQ9Y664 436 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 STYXL1Q9Y6J8 313 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 UBN2Q6ZU65 1347 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 ADGRA3Q8IWK6 1321 aa3.4□□□□□ -1.87
GTF3A-208ENST00000493903 NFAT5O94916 1531 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 IGLV8-61A0A075B6I0 122 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 TSPAN11A1L157 253 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 CENPXA8MT69 81 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 IGHV3-13P01766 116 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 TACSTD2P09758 323 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 ACSM4P0C7M7 580 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 CT45A6P0DMU7 189 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 CT45A5P0DMU8 189 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 CT45A7P0DMV0 189 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 AK4P27144 223 aaPredicted RBP3.39□□□□□ -1.87
GTF3A-208ENST00000493903 GABRR2P28476 465 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 SLC26A2P50443 739 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 DLX1P56177 255 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 MAP3K7CLP57077 242 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 RPS15AP62244 130 aaKnown RBP3.39□□□□□ -1.87
GTF3A-208ENST00000493903 SELENOTP62341 195 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 CXCL6P80162 114 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 MS4A2Q01362 244 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 ZNF92Q03936 586 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 ZNF763Q0D2J5 394 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 PSMD5Q16401 504 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 CT45A1Q5HYN5 189 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms