RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 FAM118AQ9NWS6 357 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 ASH2LQ9UBL3 628 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 POLR1DQ9Y2S0 133 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 ABCA4P78363 2273 aa15.55■□□□□ 0.08
PDLIM7-208ENST00000493815 E9PQ18 207 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 ABCD4O14678 606 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 CST2P09228 141 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 PSKH1P11801 424 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 GGT2P36268 569 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 LINC01590Q5TEZ4 76 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 ADAM5Q6NVV9 412 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 TMEM108Q6UXF1 575 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 ZNF584Q8IVC4 421 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 LINC00346Q8IVM7 164 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 PIAS4Q8N2W9 510 aaPredicted RBP15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 TMEM163Q8TC26 289 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 ZMYND19Q96E35 227 aaPredicted RBP15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 RASSF1Q9NS23 344 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 CRNNQ9UBG3 495 aaPredicted RBP15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 AASSQ9UDR5 926 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 UNC79Q9P2D8 2635 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 CADP27708 2225 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 FAM221AA4D161 298 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 IGLV1-44P01699 117 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 CCL2P13500 99 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 ZNF14P17017 642 aaPredicted RBP15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 ARR3P36575 388 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 RPS7P62081 194 aaKnown RBP15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 PSG4Q00888 419 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 RIPK1Q13546 671 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 KCNMB1Q16558 191 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 PABPC1L2AQ5JQF8 200 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 SSX8Q7RTT4 187 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 PACRGLQ8N7B6 248 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 CPEB3Q8NE35 698 aaKnown RBP15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 CLEC4MQ9H2X3 399 aaPredicted RBP15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 NDRG4Q9ULP0 352 aaKnown RBP15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 GMPPBQ9Y5P6 360 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 LHFPL6Q9Y693 200 aa15.54■□□□□ 0.08
PDLIM7-208ENST00000493815 LOC100130705A0A1B0GUX0 176 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 C12orf71A8MTZ7 269 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 RER1O15258 196 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 SLC2A5P22732 501 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 PTAFRP25105 342 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 FMO3P31513 532 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 KRTAP10-9P60411 292 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 CDC42P60953 191 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 LSM6P62312 80 aaKnown RBP15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 ADAM8P78325 824 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 APOFQ13790 326 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 ZNF774Q6NX45 483 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 TMEM53Q6P2H8 277 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 OR10H5Q8NGA6 315 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 SMAP2Q8WU79 429 aaPredicted RBP15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 CYGBQ8WWM9 190 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 NEUROG1Q92886 237 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 C14orf79Q96F83 325 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 OR2H1Q9GZK4 316 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 WNT5BQ9H1J7 359 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 IMPAD1Q9NX62 359 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 MOKQ9UQ07 419 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 COMMD3-BMI1R4GMX3 469 aa15.53■□□□□ 0.08
PDLIM7-208ENST00000493815 GLCEO94923 617 aa15.52■□□□□ 0.08
PDLIM7-208ENST00000493815 CLIC3O95833 236 aa15.52■□□□□ 0.08
PDLIM7-208ENST00000493815 CD3EP07766 207 aa15.52■□□□□ 0.08
PDLIM7-208ENST00000493815 APEX1P27695 318 aaKnown RBP15.52■□□□□ 0.08
PDLIM7-208ENST00000493815 CALCRP30988 508 aa15.52■□□□□ 0.08
PDLIM7-208ENST00000493815 NR1H2P55055 460 aa15.52■□□□□ 0.08
PDLIM7-208ENST00000493815 KBTBD8Q8NFY9 601 aa15.52■□□□□ 0.08
PDLIM7-208ENST00000493815 CDADC1Q9BWV3 514 aa15.52■□□□□ 0.08
PDLIM7-208ENST00000493815 DNAJC27Q9NZQ0 273 aa15.52■□□□□ 0.08
PDLIM7-208ENST00000493815 TIMM10BQ9Y5J6 103 aa15.52■□□□□ 0.08
PDLIM7-208ENST00000493815 CCDC182A6NF36 153 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 ATP6V1G2-DDX39BF2Z307 99 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 SERPINA5P05154 406 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 ZNF823P16415 610 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 GSTT1P30711 240 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 SSTR2P30874 369 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 PCBD1P61457 104 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 NAAAQ02083 359 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 AQP6Q13520 282 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 C1QTNF12Q5T7M4 302 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 AADACL4Q5VUY2 407 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 TMEM154Q6P9G4 183 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 SLC22A25Q6T423 547 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 DPPA2Q7Z7J5 298 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 ERI1Q8IV48 349 aaKnown RBP15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 PAQR4Q8N4S7 273 aaPredicted RBP15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 FAM169BQ8N8A8 192 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 ZNF555Q8NEP9 628 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 OR8J1Q8NGP2 316 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 RADILQ96JH8 1075 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 RDH12Q96NR8 316 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 PITX2Q99697 317 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 C8orf4Q9NR00 106 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 RNF115Q9Y4L5 304 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 ROS1P08922 2347 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 CSMD2Q7Z408 3487 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 ABCA12Q86UK0 2595 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 ZNF593O00488 134 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms