RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 MGRN1O60291 552 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 DEAF1O75398 565 aaPredicted RBP9□□□□□ -0.97
TRAPPC12-222ENST00000493792 TXNDC12O95881 172 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 CD8AP01732 235 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 HLA-DQA2P01906 255 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 IGFBP1P08833 259 aaPredicted RBP9□□□□□ -0.97
TRAPPC12-222ENST00000493792 FAM157BP0CG42 384 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 APEHP13798 732 aaKnown RBP9□□□□□ -0.97
TRAPPC12-222ENST00000493792 CTLA4P16410 223 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 POU1F1P28069 291 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 CRABP1P29762 137 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 THBS4P35443 961 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 SERPINF1P36955 418 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 ARHGDIAP52565 204 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 PCBD1P61457 104 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 SNRPD2P62316 118 aaKnown RBP9□□□□□ -0.97
TRAPPC12-222ENST00000493792 KRTAP1-1Q07627 177 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 RAB35Q15286 201 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 FAM27BQ5VT28 67 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 OTPQ5XKR4 325 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 ZNF770Q6IQ21 691 aaPredicted RBP9□□□□□ -0.97
TRAPPC12-222ENST00000493792 RASSF6Q6ZTQ3 369 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 ALDH16A1Q8IZ83 802 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 OR1J2Q8NGS2 313 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 AKR7LQ8NHP1 331 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 TEX47Q8TBZ9 253 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 ZNF75AQ96N20 296 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 FEVQ99581 238 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 VRK1Q99986 396 aaPredicted RBP9□□□□□ -0.97
TRAPPC12-222ENST00000493792 ZNF416Q9BWM5 594 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 PLA2G12AQ9BZM1 189 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 NUAK2Q9H093 628 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 C1orf198Q9H425 327 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 FN3KQ9H479 309 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 DYNLRB1Q9NP97 96 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 RPRD1BQ9NQG5 326 aaKnown RBP9□□□□□ -0.97
TRAPPC12-222ENST00000493792 POLE4Q9NR33 117 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 ZNF701Q9NV72 531 aaPredicted RBP9□□□□□ -0.97
TRAPPC12-222ENST00000493792 ARMC1Q9NVT9 282 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 VSX1Q9NZR4 365 aaPredicted RBP9□□□□□ -0.97
TRAPPC12-222ENST00000493792 KIF17Q9P2E2 1029 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 DNAJB9Q9UBS3 223 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 GDF2Q9UK05 429 aaPredicted RBP9□□□□□ -0.97
TRAPPC12-222ENST00000493792 CMAHPQ9Y471 501 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 TIMM10BQ9Y5J6 103 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 RNF212BA8MTL3 300 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 OVOL3O00110 214 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 IDH3BO43837 385 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 SSX4O60224 188 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 GPRIN2O60269 458 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 NDUFS7O75251 213 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 MPZL1O95297 269 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 GPANK1O95872 356 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 SCG5P05408 212 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 LCKP06239 509 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 CST2P09228 141 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 MMP7P09237 267 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 PRKACGP22612 351 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 NR4A1P22736 598 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 STOMP27105 288 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 GDI2P50395 445 aaKnown RBP8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 NUDT6P53370 316 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 PSG4Q00888 419 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 DBPQ10586 325 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 ENDOGQ14249 297 aaKnown RBP8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 GK3PQ14409 553 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 ADIPOQQ15848 244 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 ZNF774Q6NX45 483 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 UGT2A3Q6UWM9 527 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 TMEM179BQ7Z7N9 219 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 ZNF584Q8IVC4 421 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 GLB1L2Q8IW92 636 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 HS3ST5Q8IZT8 346 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 SVOPLQ8N434 492 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 ATG16L2Q8NAA4 619 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 CYB561A3Q8NBI2 242 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 NUP37Q8NFH4 326 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 OR10H5Q8NGA6 315 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 SLCO4A1Q96BD0 722 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 OTULINQ96BN8 352 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 NIPSNAP1Q9BPW8 284 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 DGCR6LQ9BY27 220 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 OR2H1Q9GZK4 316 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 EIF3KQ9UBQ5 218 aaKnown RBP8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 FZR1Q9UM11 496 aa8.99□□□□□ -0.97
TRAPPC12-222ENST00000493792 C5orf49A4QMS7 147 aa8.98□□□□□ -0.97
TRAPPC12-222ENST00000493792 B9A039 149 aa8.98□□□□□ -0.97
TRAPPC12-222ENST00000493792 DOK2O60496 412 aa8.98□□□□□ -0.97
TRAPPC12-222ENST00000493792 ZNF35P13682 527 aa8.98□□□□□ -0.97
TRAPPC12-222ENST00000493792 HTR5AP47898 357 aa8.98□□□□□ -0.97
TRAPPC12-222ENST00000493792 RPS23P62266 143 aaKnown RBP8.98□□□□□ -0.97
TRAPPC12-222ENST00000493792 GLO1Q04760 184 aa8.98□□□□□ -0.97
TRAPPC12-222ENST00000493792 CCNIQ14094 377 aa8.98□□□□□ -0.97
TRAPPC12-222ENST00000493792 MEP1BQ16820 701 aa8.98□□□□□ -0.97
TRAPPC12-222ENST00000493792 SLC36A3Q495N2 470 aa8.98□□□□□ -0.97
TRAPPC12-222ENST00000493792 C11orf71Q6IPW1 123 aa8.98□□□□□ -0.97
TRAPPC12-222ENST00000493792 FOXL2NBQ6ZUU3 175 aa8.98□□□□□ -0.97
TRAPPC12-222ENST00000493792 PAQR4Q8N4S7 273 aaPredicted RBP8.98□□□□□ -0.97
TRAPPC12-222ENST00000493792 PAPD5Q8NDF8 572 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms