RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ACTR3CQ9C0K3 210 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 NXF2Q9GZY0 626 aaKnown RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 NXF5Q9H1B4 397 aaKnown RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 CLMPQ9H6B4 373 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 SAP30LQ9HAJ7 183 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 RETNQ9HD89 108 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 B3GAT2Q9NPZ5 323 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 SLC17A5Q9NRA2 495 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 C1orf123Q9NWV4 160 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 IL36GQ9NZH8 169 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 FRRS1LQ9P0K9 344 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 RCC2Q9P258 522 aaKnown RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 CCNL1Q9UK58 526 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 STUB1Q9UNE7 303 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 SSR3Q9UNL2 185 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 SAMD4AQ9UPU9 718 aaKnown RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 LAMP3Q9UQV4 416 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 UTP11Q9Y3A2 253 aaKnown RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 FBXO7Q9Y3I1 522 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 UGT2A1Q9Y4X1 527 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 HSPE1-MOB4S4R3N1 261 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 CACNA1FO60840 1977 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 NSG1A0A0A6YYJ2 146 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 A0A1W2PQJ5 194 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TMEM200CA6NKL6 621 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 MPTX1A8MV57 137 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 H3BS24 57 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 I3L521 148 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 SSNA1O43805 119 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TPST1O60507 370 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 WISP1O95388 367 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 GIPP09681 153 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 CSF3P09919 207 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TSPAN19P0C672 248 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 UQCRBP14927 111 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 FSTP19883 344 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 MAKP20794 623 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 AADACP22760 399 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 HMGB2P26583 209 aaKnown RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 NSG1P42857 185 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 KIR2DS4P43632 304 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 XCR1P46094 333 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TCL1AP56279 114 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TBPL1P62380 186 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 NTHL1P78549 312 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 EMX1Q04741 257 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 IL10RBQ08334 325 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF415Q09FC8 603 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 GTF2H2Q13888 395 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF235Q14590 738 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF239Q16600 458 aaKnown RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TCTN1Q2MV58 587 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 C2orf68Q2NKX9 166 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 PRSS36Q5K4E3 855 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 FNBP1LQ5T0N5 605 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 AGBL4Q5VU57 503 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 KIAA0895LQ68EN5 471 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 VASNQ6EMK4 673 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 GTF2H2CQ6P1K8 395 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 SLC25A47Q6Q0C1 308 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 Q6ZT83 130 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 SLC29A4Q7RTT9 530 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 GLT6D1Q7Z4J2 308 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 C10orf107Q8IVU9 208 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 C12orf45Q8N5I9 185 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 GCSAMQ8N6F7 178 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 BMPERQ8N8U9 685 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ACOT4Q8N9L9 421 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 VN1R2Q8NFZ6 395 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 GPR32P1Q8NGA4 272 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 OR5J2Q8NH18 312 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ACER1Q8TDN7 264 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 HAVCR2Q8TDQ0 301 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TBCKQ8TEA7 893 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 NPRL2Q8WTW4 380 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 Q8WTZ3 238 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 SLC38A5Q8WUX1 472 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 DCAKDQ8WVC6 231 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 HPSE2Q8WWQ2 592 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 MYLIPQ8WY64 445 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 DNASE2BQ8WZ79 361 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 UCN3Q969E3 161 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 MYLPFQ96A32 169 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 RSPRY1Q96DX4 576 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 SEH1LQ96EE3 360 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 WDYHV1Q96HA8 205 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TMEM19Q96HH6 336 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 CAPNS2Q96L46 248 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 P2RX4Q99571 388 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ATP5SQ99766 215 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 PECRQ9BY49 303 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 PPDPFQ9H3Y8 114 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 DSN1Q9H410 356 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 IKZF5Q9H5V7 419 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 FAM96AQ9H5X1 160 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF703Q9H7S9 590 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 FOXJ2Q9P0K8 574 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 B3GAT1Q9P2W7 334 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 PURGQ9UJV8 347 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms