RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 ZNF747Q9BV97 191 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 CCNB1IP1Q9NPC3 277 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 MAN2C1Q9NTJ4 1040 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 ZNF69Q9UC07 566 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 A4GNTQ9UNA3 340 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 PPIAL4AQ9Y536 164 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 ANGPT2O15123 496 aa13.1□□□□□ -0.31
COL2A1-207ENST00000490609 HKR1P10072 659 aa13.1□□□□□ -0.31
COL2A1-207ENST00000490609 ZNF26P17031 533 aaPredicted RBP13.1□□□□□ -0.31
COL2A1-207ENST00000490609 GATA3P23771 443 aa13.1□□□□□ -0.31
COL2A1-207ENST00000490609 GDI2P50395 445 aaKnown RBP13.1□□□□□ -0.31
COL2A1-207ENST00000490609 ERFP50548 548 aa13.1□□□□□ -0.31
COL2A1-207ENST00000490609 TAS2R41P59536 307 aa13.1□□□□□ -0.31
COL2A1-207ENST00000490609 RPL27P61353 136 aaKnown RBP13.1□□□□□ -0.31
COL2A1-207ENST00000490609 IGFN1Q86VF2 1251 aa13.1□□□□□ -0.31
COL2A1-207ENST00000490609 ABHD4Q8TB40 342 aa13.1□□□□□ -0.31
COL2A1-207ENST00000490609 SLC26A7Q8TE54 656 aa13.1□□□□□ -0.31
COL2A1-207ENST00000490609 TIMD4Q96H15 378 aa13.1□□□□□ -0.31
COL2A1-207ENST00000490609 C4orf45Q96LM5 186 aa13.1□□□□□ -0.31
COL2A1-207ENST00000490609 JMJD8Q96S16 334 aa13.1□□□□□ -0.31
COL2A1-207ENST00000490609 GAL3ST1Q99999 423 aa13.1□□□□□ -0.31
COL2A1-207ENST00000490609 GMPR2Q9P2T1 348 aaKnown RBP13.1□□□□□ -0.31
COL2A1-207ENST00000490609 EGFL7Q9UHF1 273 aa13.1□□□□□ -0.31
COL2A1-207ENST00000490609 SNX13Q9Y5W8 968 aa13.1□□□□□ -0.31
COL2A1-207ENST00000490609 NPTNQ9Y639 398 aa13.1□□□□□ -0.31
COL2A1-207ENST00000490609 F5H0A9 414 aaPredicted RBP13.09□□□□□ -0.31
COL2A1-207ENST00000490609 FFAR1O14842 300 aa13.09□□□□□ -0.31
COL2A1-207ENST00000490609 GCH1P30793 250 aa13.09□□□□□ -0.31
COL2A1-207ENST00000490609 SLC6A9P48067 706 aa13.09□□□□□ -0.31
COL2A1-207ENST00000490609 PAX2Q02962 417 aa13.09□□□□□ -0.31
COL2A1-207ENST00000490609 ALG10Q5BKT4 473 aa13.09□□□□□ -0.31
COL2A1-207ENST00000490609 INTS11Q5TA45 600 aaKnown RBP13.09□□□□□ -0.31
COL2A1-207ENST00000490609 DOK3Q7L591 496 aa13.09□□□□□ -0.31
COL2A1-207ENST00000490609 TEX29Q8N6K0 151 aa13.09□□□□□ -0.31
COL2A1-207ENST00000490609 ZNF283Q8N7M2 679 aa13.09□□□□□ -0.31
COL2A1-207ENST00000490609 RASSF5Q8WWW0 418 aa13.09□□□□□ -0.31
COL2A1-207ENST00000490609 DUX5Q96PT3 197 aa13.09□□□□□ -0.31
COL2A1-207ENST00000490609 DCLRE1CQ96SD1 692 aaKnown RBP13.09□□□□□ -0.31
COL2A1-207ENST00000490609 ALG12Q9BV10 488 aa13.09□□□□□ -0.31
COL2A1-207ENST00000490609 POLR2J2Q9GZM3 115 aaKnown RBP13.09□□□□□ -0.31
COL2A1-207ENST00000490609 POLR2J3Q9H1A7 115 aaKnown RBP13.09□□□□□ -0.31
COL2A1-207ENST00000490609 UBAP1Q9NZ09 502 aa13.09□□□□□ -0.31
COL2A1-207ENST00000490609 EIF3KQ9UBQ5 218 aaKnown RBP13.09□□□□□ -0.31
COL2A1-207ENST00000490609 PURGQ9UJV8 347 aaKnown RBP13.09□□□□□ -0.31
COL2A1-207ENST00000490609 ZDHHC8Q9ULC8 765 aa13.09□□□□□ -0.31
COL2A1-207ENST00000490609 TIMM10BQ9Y5J6 103 aa13.09□□□□□ -0.31
COL2A1-207ENST00000490609 MT-ND5P03915 603 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 SBK2P0C263 348 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 THRBP10828 461 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 ZNF12P17014 697 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 CD47Q08722 323 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 ZNF154Q13106 437 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 TOP3AQ13472 1001 aaPredicted RBP13.08□□□□□ -0.32
COL2A1-207ENST00000490609 ZMYND11Q15326 602 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 OTPQ5XKR4 325 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 LRRC28Q86X40 367 aaPredicted RBP13.08□□□□□ -0.32
COL2A1-207ENST00000490609 BPIFB2Q8N4F0 458 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 C10orf82Q8WW14 230 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 BPIFA2Q96DR5 249 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 MAGEB18Q96M61 343 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 KCNN2Q9H2S1 579 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 PATZ1Q9HBE1 687 aaKnown RBP13.08□□□□□ -0.32
COL2A1-207ENST00000490609 POLE4Q9NR33 117 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 TMEM106BQ9NUM4 274 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 STARD10Q9Y365 291 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 MED31Q9Y3C7 131 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 INSIG2Q9Y5U4 225 aa13.08□□□□□ -0.32
COL2A1-207ENST00000490609 TRAV27A0A087WT01 109 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 PLSCR5A0PG75 271 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 ISPDA4D126 451 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 H3BSA7 217 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 IMPA2O14732 288 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 EDF1O60869 148 aaKnown RBP13.07□□□□□ -0.32
COL2A1-207ENST00000490609 CD80P33681 288 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 LIPAP38571 399 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 CTXN1P60606 82 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 TNFAIP6P98066 277 aaPredicted RBP13.07□□□□□ -0.32
COL2A1-207ENST00000490609 TAF11Q15544 211 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 CYBRD1Q53TN4 286 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 MTX3Q5HYI7 312 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 HDDC2Q7Z4H3 204 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 TSEN54Q7Z6J9 526 aaKnown RBP13.07□□□□□ -0.32
COL2A1-207ENST00000490609 OR8J3Q8NGG0 315 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 SLC7A6Q92536 515 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 DACT3Q96B18 629 aaPredicted RBP13.07□□□□□ -0.32
COL2A1-207ENST00000490609 EGLN1Q9GZT9 426 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 ZNF696Q9H7X3 374 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 NTN4Q9HB63 628 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 EMC7Q9NPA0 242 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 CYSLTR2Q9NS75 346 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 BAG5Q9UL15 447 aa13.07□□□□□ -0.32
COL2A1-207ENST00000490609 DNAJC9-AS1A6NH13 148 aa13.06□□□□□ -0.32
COL2A1-207ENST00000490609 A8MXK9 166 aa13.06□□□□□ -0.32
COL2A1-207ENST00000490609 H7C1C5 153 aa13.06□□□□□ -0.32
COL2A1-207ENST00000490609 J3KTA2 159 aa13.06□□□□□ -0.32
COL2A1-207ENST00000490609 CDC42EP2O14613 210 aa13.06□□□□□ -0.32
COL2A1-207ENST00000490609 FOXH1O75593 365 aa13.06□□□□□ -0.32
COL2A1-207ENST00000490609 IFI30P13284 250 aa13.06□□□□□ -0.32
COL2A1-207ENST00000490609 KITLGP21583 273 aa13.06□□□□□ -0.32
COL2A1-207ENST00000490609 PRTN3P24158 256 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms