RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 NAT2P11245 290 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 ARHGDIAP52565 204 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 ERVS71-1P61550 626 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 SEC23BQ15437 767 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 PCGF3Q3KNV8 242 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 ZNF718Q3SXZ3 478 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 DNM1P34Q6PK57 102 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 SMARCD3Q6STE5 483 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 UGT2A3Q6UWM9 527 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 FANK1Q8TC84 345 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 RASD2Q96D21 266 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 POM121L2Q96KW2 1035 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 CCT8L2Q96SF2 557 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 ZNF416Q9BWM5 594 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 BEX2Q9BXY8 128 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 SHARPINQ9H0F6 387 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 WNT5BQ9H1J7 359 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 CHODLQ9H9P2 273 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 ELOVL3Q9HB03 270 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 TMEM160Q9NX00 188 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 IL20RAQ9UHF4 553 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 IER3IP1Q9Y5U9 82 aa14.96□□□□□ -0.01
SEC13-218ENST00000490283 JMJD1CQ15652 2540 aa14.96□□□□□ -0.02
SEC13-218ENST00000490283 C17orf100A8MU93 164 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 SOCS2O14508 198 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 DYNC1I1O14576 645 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 TPD52L2O43399 206 aaKnown RBP14.95□□□□□ -0.02
SEC13-218ENST00000490283 LMX1BO60663 402 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 SLC16A7O60669 478 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 KHDRBS3O75525 346 aaKnown RBP14.95□□□□□ -0.02
SEC13-218ENST00000490283 CLPTM1O96005 669 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 SEMG1P04279 462 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 ZNF26P17031 533 aaPredicted RBP14.95□□□□□ -0.02
SEC13-218ENST00000490283 ACHEP22303 614 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 RRM2P31350 389 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 SLC6A6P31641 620 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 ENDOGQ14249 297 aaKnown RBP14.95□□□□□ -0.02
SEC13-218ENST00000490283 ZNF774Q6NX45 483 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 ZDHHC21Q8IVQ6 265 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 ARHGAP24Q8N264 748 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 CCDC197Q8NCU1 140 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 ABHD4Q8TB40 342 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 HPS1Q92902 700 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 SYT4Q9H2B2 425 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 EMC7Q9NPA0 242 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 IL1RAPQ9NPH3 570 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 POLR1DQ9Y2S0 133 aa14.95□□□□□ -0.02
SEC13-218ENST00000490283 SONP18583 2426 aaKnown RBP14.94□□□□□ -0.02
SEC13-218ENST00000490283 LOC100509620A0A075B734 347 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 PLSCR5A0PG75 271 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 B2RBV5 119 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 LYNX1G3V0Z9 82 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 DOK2O60496 412 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 FAM107AO95990 144 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 HPXP02790 462 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 TACSTD2P09758 323 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 LYNX1P0DP58 116 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 CTLA4P16410 223 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 HNF1AP20823 631 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 GPR6P46095 362 aaPredicted RBP14.94□□□□□ -0.02
SEC13-218ENST00000490283 MRPS11P82912 194 aaKnown RBP14.94□□□□□ -0.02
SEC13-218ENST00000490283 TEKQ02763 1124 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 GLO1Q04760 184 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 AQP6Q13520 282 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 RIN1Q13671 783 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 MTX3Q5HYI7 312 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 THSD4Q6ZMP0 1018 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 JAZF1Q86VZ6 243 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 GLB1L2Q8IW92 636 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 NSL1Q96IY1 281 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 ERMAPQ96PL5 475 aaPredicted RBP14.94□□□□□ -0.02
SEC13-218ENST00000490283 SNX18Q96RF0 628 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 MUC13Q9H3R2 512 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 DECR2Q9NUI1 292 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 VSX1Q9NZR4 365 aaPredicted RBP14.94□□□□□ -0.02
SEC13-218ENST00000490283 ACTR3BQ9P1U1 418 aa14.94□□□□□ -0.02
SEC13-218ENST00000490283 LRP5LA4QPB2 252 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 KIAA1324LA8MWY0 1029 aaPredicted RBP14.93□□□□□ -0.02
SEC13-218ENST00000490283 H3BSA7 217 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 SGCEO43556 437 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 KRT36O76013 467 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 ABHD16AO95870 558 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 TGFAP01135 160 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 IGHV3-13P01766 116 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 COX5BP10606 129 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 FPR3P25089 353 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 NOS3P29474 1203 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 CRABP1P29762 137 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 WNT5AP41221 380 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 HTR5AP47898 357 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 CENPAP49450 140 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 PPP1CBP62140 327 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 ELFN2Q5R3F8 820 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 SPATA46Q5T0L3 261 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 PGM2L1Q6PCE3 622 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 CYP2R1Q6VVX0 501 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 ZER1Q7Z7L7 766 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 ZNF101Q8IZC7 436 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 FITM2Q8N6M3 262 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 MSI2Q96DH6 328 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms