RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 LRRC58Q96CX6 371 aa13.4□□□□□ -0.26
PLOD3-216ENST00000489927 THOC1Q96FV9 657 aaKnown RBP13.4□□□□□ -0.26
PLOD3-216ENST00000489927 DUX5Q96PT3 197 aa13.4□□□□□ -0.26
PLOD3-216ENST00000489927 DCLRE1CQ96SD1 692 aaKnown RBP13.4□□□□□ -0.26
PLOD3-216ENST00000489927 DIRC2Q96SL1 478 aa13.4□□□□□ -0.26
PLOD3-216ENST00000489927 TXNIPQ9H3M7 391 aa13.4□□□□□ -0.26
PLOD3-216ENST00000489927 RIMS3Q9UJD0 308 aa13.4□□□□□ -0.26
PLOD3-216ENST00000489927 ARHGAP32A7KAX9 2087 aa13.4□□□□□ -0.27
PLOD3-216ENST00000489927 WNK2Q9Y3S1 2297 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 GMNCA6NCL1 334 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 TRAPPC2LH3BP13 241 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 H3BSA7 217 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 CST2P09228 141 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 NR2C1P13056 603 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 PRTN3P24158 256 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 SEC61A1P61619 476 aaKnown RBP13.39□□□□□ -0.27
PLOD3-216ENST00000489927 TNFAIP6P98066 277 aaPredicted RBP13.39□□□□□ -0.27
PLOD3-216ENST00000489927 ALG10Q5BKT4 473 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 ZMAT1Q5H9K5 638 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 ARMCX4Q5H9R4 360 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 MTX3Q5HYI7 312 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 KLF17Q5JT82 389 aaPredicted RBP13.39□□□□□ -0.27
PLOD3-216ENST00000489927 AGBL2Q5U5Z8 902 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 ZNF774Q6NX45 483 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 DOK3Q7L591 496 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 C4orf45Q96LM5 186 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 C1orf147Q96MC9 270 aaPredicted RBP13.39□□□□□ -0.27
PLOD3-216ENST00000489927 ALG12Q9BV10 488 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 POLR2J2Q9GZM3 115 aaKnown RBP13.39□□□□□ -0.27
PLOD3-216ENST00000489927 POLR2J3Q9H1A7 115 aaKnown RBP13.39□□□□□ -0.27
PLOD3-216ENST00000489927 ZNF696Q9H7X3 374 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 TMEM106BQ9NUM4 274 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 ZNF69Q9UC07 566 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 EGFL7Q9UHF1 273 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 NUP50Q9UKX7 468 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 MED31Q9Y3C7 131 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 TIMM10BQ9Y5J6 103 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 TANC2Q9HCD6 1990 aa13.39□□□□□ -0.27
PLOD3-216ENST00000489927 DNAJC9-AS1A6NH13 148 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 TIMM8AO60220 97 aaPredicted RBP13.38□□□□□ -0.27
PLOD3-216ENST00000489927 PIP5K1CO60331 668 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 IGHMP01871 453 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 OR1E2P47887 323 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 ARHGDIAP52565 204 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 PSG7Q13046 419 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 ZNF154Q13106 437 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 CDK5R2Q13319 367 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 TAF11Q15544 211 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 NANOGP8Q6NSW7 305 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 BCL6BQ8N143 479 aaPredicted RBP13.38□□□□□ -0.27
PLOD3-216ENST00000489927 KLHL36Q8N4N3 616 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 SPICQ8N5J4 248 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 TSPEARQ8WU66 669 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 DYDC1Q8WWB3 177 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 RBP7Q96R05 134 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 ELOVL3Q9HB03 270 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 PATZ1Q9HBE1 687 aaKnown RBP13.38□□□□□ -0.27
PLOD3-216ENST00000489927 PLEK2Q9NYT0 353 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 BAG5Q9UL15 447 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 HIF3AQ9Y2N7 669 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 POLR3KQ9Y2Y1 108 aaPredicted RBP13.38□□□□□ -0.27
PLOD3-216ENST00000489927 AUP1Q9Y679 476 aa13.38□□□□□ -0.27
PLOD3-216ENST00000489927 A0A1W2PPL8 197 aa13.37□□□□□ -0.27
PLOD3-216ENST00000489927 ZNF12P17014 697 aa13.37□□□□□ -0.27
PLOD3-216ENST00000489927 SLC6A9P48067 706 aa13.37□□□□□ -0.27
PLOD3-216ENST00000489927 RPL27P61353 136 aaKnown RBP13.37□□□□□ -0.27
PLOD3-216ENST00000489927 PCBD1P61457 104 aa13.37□□□□□ -0.27
PLOD3-216ENST00000489927 ENDOGQ14249 297 aaKnown RBP13.37□□□□□ -0.27
PLOD3-216ENST00000489927 RABL3Q5HYI8 236 aa13.37□□□□□ -0.27
PLOD3-216ENST00000489927 FOXL2NBQ6ZUU3 175 aa13.37□□□□□ -0.27
PLOD3-216ENST00000489927 IGFN1Q86VF2 1251 aa13.37□□□□□ -0.27
PLOD3-216ENST00000489927 STON2Q8WXE9 905 aa13.37□□□□□ -0.27
PLOD3-216ENST00000489927 ZNF48Q96MX3 618 aaPredicted RBP13.37□□□□□ -0.27
PLOD3-216ENST00000489927 POFUT1Q9H488 388 aa13.37□□□□□ -0.27
PLOD3-216ENST00000489927 INSIG2Q9Y5U4 225 aa13.37□□□□□ -0.27
PLOD3-216ENST00000489927 FBP2O00757 339 aa13.36□□□□□ -0.27
PLOD3-216ENST00000489927 SCG5P05408 212 aa13.36□□□□□ -0.27
PLOD3-216ENST00000489927 THRBP10828 461 aa13.36□□□□□ -0.27
PLOD3-216ENST00000489927 GUCA1AP43080 201 aaPredicted RBP13.36□□□□□ -0.27
PLOD3-216ENST00000489927 BTG1P62324 171 aa13.36□□□□□ -0.27
PLOD3-216ENST00000489927 BAMBIQ13145 260 aa13.36□□□□□ -0.27
PLOD3-216ENST00000489927 ZMYND11Q15326 602 aa13.36□□□□□ -0.27
PLOD3-216ENST00000489927 TMEM155Q4W5P6 130 aa13.36□□□□□ -0.27
PLOD3-216ENST00000489927 ARL9Q6T311 187 aa13.36□□□□□ -0.27
PLOD3-216ENST00000489927 ZER1Q7Z7L7 766 aa13.36□□□□□ -0.27
PLOD3-216ENST00000489927 LRRC28Q86X40 367 aaPredicted RBP13.36□□□□□ -0.27
PLOD3-216ENST00000489927 CALHM3Q86XJ0 350 aa13.36□□□□□ -0.27
PLOD3-216ENST00000489927 ZNF283Q8N7M2 679 aa13.36□□□□□ -0.27
PLOD3-216ENST00000489927 OR2Z1Q8NG97 314 aa13.36□□□□□ -0.27
PLOD3-216ENST00000489927 FNDC8Q8TC99 324 aa13.36□□□□□ -0.27
PLOD3-216ENST00000489927 BPIFA2Q96DR5 249 aa13.36□□□□□ -0.27
PLOD3-216ENST00000489927 SAMD8Q96LT4 415 aa13.36□□□□□ -0.27
PLOD3-216ENST00000489927 SIGLEC11Q96RL6 698 aa13.36□□□□□ -0.27
PLOD3-216ENST00000489927 GPA33Q99795 319 aa13.36□□□□□ -0.27
PLOD3-216ENST00000489927 ZMAT3Q9HA38 289 aaKnown RBP13.36□□□□□ -0.27
PLOD3-216ENST00000489927 A8MXK9 166 aa13.35□□□□□ -0.27
PLOD3-216ENST00000489927 ABHD16AO95870 558 aa13.35□□□□□ -0.27
PLOD3-216ENST00000489927 IFI30P13284 250 aa13.35□□□□□ -0.27
PLOD3-216ENST00000489927 TNFRSF1AP19438 455 aa13.35□□□□□ -0.27
PLOD3-216ENST00000489927 GSTM3P21266 225 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms