RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 S100PBPQ96BU1 408 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 COPS4Q9BT78 406 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 ACTR6Q9GZN1 396 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 NELFAQ9H3P2 528 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 ADGRL4Q9HBW9 690 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 HAO2Q9NYQ3 351 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 COMMD3-BMI1R4GMX3 469 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 FARS2O95363 451 aaKnown RBP12.48□□□□□ -0.41
CLDN11-209ENST00000489485 SBK2P0C263 348 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 OR8G3PP0DMU2 310 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 NPR2P20594 1047 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 C21orf33P30042 268 aaPredicted RBP12.48□□□□□ -0.41
CLDN11-209ENST00000489485 RPS27P42677 84 aaKnown RBP12.48□□□□□ -0.41
CLDN11-209ENST00000489485 HCCSP53701 268 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 MRPS34P82930 218 aaKnown RBP12.48□□□□□ -0.41
CLDN11-209ENST00000489485 HSF2Q03933 536 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 TFF3Q07654 80 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 RAB40BQ12829 278 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 TMED1Q13445 227 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 SNTB1Q13884 538 aaKnown RBP12.48□□□□□ -0.41
CLDN11-209ENST00000489485 KLHL22Q53GT1 634 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 FOXB2Q5VYV0 432 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 STEAP2Q8NFT2 490 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 SLC26A10Q8NG04 563 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 YTHDF1Q9BYJ9 559 aaKnown RBP12.48□□□□□ -0.41
CLDN11-209ENST00000489485 DUSP21Q9H596 190 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 SIAEQ9HAT2 523 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 MRPL22Q9NWU5 206 aaKnown RBP12.48□□□□□ -0.41
CLDN11-209ENST00000489485 PRR14LQ5THK1 2151 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 UTP20O75691 2785 aaKnown RBP12.47□□□□□ -0.41
CLDN11-209ENST00000489485 A0A1W2PR80 420 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 EFCAB10A6NFE3 127 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 SCG5P05408 212 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 MSR1P21757 451 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 CCKARP32238 428 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 BLVRAP53004 296 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 CDH15P55291 814 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 ADAM8P78325 824 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 GGTLC2Q14390 218 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 TBRG1Q3YBR2 411 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 ALKBH2Q6NS38 261 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 STX19Q8N4C7 294 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 C1orf162Q8NEQ5 155 aaPredicted RBP12.47□□□□□ -0.41
CLDN11-209ENST00000489485 OR52I1Q8NGK6 324 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 NABP1Q96AH0 204 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 CNN2Q99439 309 aaKnown RBP12.47□□□□□ -0.41
CLDN11-209ENST00000489485 TBX5Q99593 518 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 CCDC90BQ9GZT6 254 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 EMC7Q9NPA0 242 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 POLE4Q9NR33 117 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 MRPS18AQ9NVS2 196 aaKnown RBP12.47□□□□□ -0.41
CLDN11-209ENST00000489485 ERVK-18Q9QC07 812 aa12.47□□□□□ -0.41
CLDN11-209ENST00000489485 ANKHD1Q8IWZ3 2542 aaKnown RBP12.47□□□□□ -0.41
CLDN11-209ENST00000489485 OR5H1A6NKK0 313 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 FADS2O95864 444 aaKnown RBP12.46□□□□□ -0.41
CLDN11-209ENST00000489485 ADRA2AP08913 450 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 GAAP10253 952 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 UBE2NP61088 152 aaKnown RBP12.46□□□□□ -0.41
CLDN11-209ENST00000489485 POU4F2Q12837 409 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 CNPY1Q3B7I2 92 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 NRN1LQ496H8 165 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 ZNF627Q7L945 461 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 SLC16A14Q7RTX9 510 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 DPY19L4Q7Z388 723 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 SKA3Q8IX90 412 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 TIGD4Q8IY51 512 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 OR10H5Q8NGA6 315 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 OR6N2Q8NGY6 317 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 OR52N5Q8NH56 324 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 IPCEF1Q8WWN9 437 aaPredicted RBP12.46□□□□□ -0.41
CLDN11-209ENST00000489485 C11orf40Q8WZ69 217 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 BCL2L2Q92843 193 aaPredicted RBP12.46□□□□□ -0.41
CLDN11-209ENST00000489485 INTS14Q96SY0 518 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 KCNN2Q9H2S1 579 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 FKBP14Q9NWM8 211 aa12.46□□□□□ -0.41
CLDN11-209ENST00000489485 CNOT2Q9NZN8 540 aaKnown RBP12.46□□□□□ -0.41
CLDN11-209ENST00000489485 EXOGQ9Y2C4 368 aaKnown RBP12.46□□□□□ -0.41
CLDN11-209ENST00000489485 CLEC18AA5D8T8 446 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 ZNF593O00488 134 aaPredicted RBP12.46□□□□□ -0.42
CLDN11-209ENST00000489485 PIPP12273 146 aaPredicted RBP12.46□□□□□ -0.42
CLDN11-209ENST00000489485 ZNF823P16415 610 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 TUBA1BP68363 451 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 TUBA4AP68366 448 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 KCTD21Q4G0X4 260 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 FAM27BQ5VT28 67 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 CLEC18BQ6UXF7 455 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 FOXL2NBQ6ZUU3 175 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 TUBA1AQ71U36 451 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 C17orf78Q8N4C9 275 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 CLEC18CQ8NCF0 446 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 OR10H4Q8NGA5 316 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 MYDGFQ969H8 173 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 ZC3HAV1LQ96H79 300 aaKnown RBP12.46□□□□□ -0.42
CLDN11-209ENST00000489485 TMEM80Q96HE8 168 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 MED18Q9BUE0 208 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 ZNF416Q9BWM5 594 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 CDADC1Q9BWV3 514 aa12.46□□□□□ -0.42
CLDN11-209ENST00000489485 MRPS26Q9BYN8 205 aaKnown RBP12.46□□□□□ -0.42
CLDN11-209ENST00000489485 NPDC1Q9NQX5 325 aaPredicted RBP12.46□□□□□ -0.42
CLDN11-209ENST00000489485 POLR1DQ9Y2S0 133 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms