RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 BNIP1Q12981 228 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 MICAQ29983 383 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 CLEC12AQ5QGZ9 265 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 RGS7BPQ6MZT1 257 aaPredicted RBP11.54□□□□□ -0.56
CCL28-202ENST00000489442 PGM2L1Q6PCE3 622 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 UNQ6126/PRO20091Q6UXV3 157 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 ZNF620Q6ZNG0 422 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 FOXL2NBQ6ZUU3 175 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 PTCHD4Q6ZW05 846 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 SYT9Q86SS6 491 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 GLB1L2Q8IW92 636 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 ADGRG5Q8IZF4 528 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 AQP11Q8NBQ7 271 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 CPEB3Q8NE35 698 aaKnown RBP11.54□□□□□ -0.56
CCL28-202ENST00000489442 OR4C15Q8NGM1 316 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 OR4K13Q8NH42 304 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 CANT1Q8WVQ1 401 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 C11orf40Q8WZ69 217 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 MRPL24Q96A35 216 aaKnown RBP11.54□□□□□ -0.56
CCL28-202ENST00000489442 SMR3AQ99954 134 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 SYT3Q9BQG1 590 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 WACQ9BTA9 647 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 BCL2L14Q9BZR8 327 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 OR2H1Q9GZK4 316 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 NUAK2Q9H093 628 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 EGLN3Q9H6Z9 239 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 SRA1Q9HD15 236 aaKnown RBP11.54□□□□□ -0.56
CCL28-202ENST00000489442 FZR1Q9UM11 496 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 POMPQ9Y244 141 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 COA3Q9Y2R0 106 aaPredicted RBP11.54□□□□□ -0.56
CCL28-202ENST00000489442 POLR1DQ9Y2S0 133 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 CDH10Q9Y6N8 788 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 ABCA1O95477 2261 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 NF1P21359 2839 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 HIVEP2P31629 2446 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 A0A1W2PPW3 197 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 E2F6O75461 281 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 LY6HO94772 140 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 SNAP29O95721 258 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 HIST1H1CP16403 213 aaKnown RBP11.53□□□□□ -0.56
CCL28-202ENST00000489442 GSTM3P21266 225 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 EVX1P49640 407 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 PPOXP50336 477 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 UCP2P55851 309 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 SCRN3Q0VDG4 424 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 ENDOGQ14249 297 aaKnown RBP11.53□□□□□ -0.56
CCL28-202ENST00000489442 CARTPTQ16568 116 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 SLC35F1Q5T1Q4 408 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 ZNF774Q6NX45 483 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 ARL9Q6T311 187 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 UGT2A3Q6UWM9 527 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.53□□□□□ -0.56
CCL28-202ENST00000489442 PAQR4Q8N4S7 273 aaPredicted RBP11.53□□□□□ -0.56
CCL28-202ENST00000489442 ZNF525Q8N782 197 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 FAM168AQ92567 244 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 TSSK2Q96PF2 358 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 SORCS2Q96PQ0 1159 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 NMNAT3Q96T66 252 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 DOK1Q99704 481 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 CADM1Q9BY67 442 aaKnown RBP11.53□□□□□ -0.56
CCL28-202ENST00000489442 REG4Q9BYZ8 158 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 MRPL37Q9BZE1 423 aaKnown RBP11.53□□□□□ -0.56
CCL28-202ENST00000489442 WNT5BQ9H1J7 359 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 TBC1D23Q9NUY8 699 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 VNN3Q9NY84 501 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 GPR160Q9UJ42 338 aa11.53□□□□□ -0.56
CCL28-202ENST00000489442 TMEM129A0AVI4 362 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 M0R233 179 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 SYNGR3O43761 229 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 SCG5P05408 212 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 ADRA2AP08913 450 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 CSF3P09919 207 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 PCSK6P29122 969 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 ERFP50548 548 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 GK3PQ14409 553 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 ZNF770Q6IQ21 691 aaPredicted RBP11.52□□□□□ -0.57
CCL28-202ENST00000489442 RASSF6Q6ZTQ3 369 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 Q71RC1 249 aaPredicted RBP11.52□□□□□ -0.57
CCL28-202ENST00000489442 ZCCHC24Q8N2G6 241 aaKnown RBP11.52□□□□□ -0.57
CCL28-202ENST00000489442 OR10G2Q8NGC3 310 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 OR52E2Q8NGJ4 325 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 OR1J1Q8NGS3 322 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 SYNPRQ8TBG9 265 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 GIPC3Q8TF64 312 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 POM121L2Q96KW2 1035 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 MS4A5Q9H3V2 200 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 RPRD1BQ9NQG5 326 aaKnown RBP11.52□□□□□ -0.57
CCL28-202ENST00000489442 IL20Q9NYY1 176 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 REV1Q9UBZ9 1251 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 NDRG4Q9ULP0 352 aaKnown RBP11.52□□□□□ -0.57
CCL28-202ENST00000489442 CR1P17927 2039 aa11.52□□□□□ -0.57
CCL28-202ENST00000489442 NAV3Q8IVL0 2385 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 LOC100509620A0A075B734 347 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 SGCEO43556 437 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 DOK2O60496 412 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 MPZL1O95297 269 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 LY6G6DO95868 133 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 HLA-DQA2P01906 255 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 PDLIM4P50479 330 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 ARHGDIAP52565 204 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms