RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 G6PC2Q9NQR9 355 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 EMC3Q9P0I2 261 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 RAB26Q9ULW5 256 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 SLC7A7Q9UM01 511 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 PHF3Q92576 2039 aaKnown RBP7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 NSD1Q96L73 2696 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 FLNAP21333 2647 aaKnown RBP7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 ARHGAP21Q5T5U3 1957 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 MED12Q93074 2177 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 IGHV3-15A0A0B4J1V0 119 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 A0A1W2PNV4 684 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 MAGEA13PA6NCF6 341 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 LIPT2A6NK58 231 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 KDM4EB2RXH2 506 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 EEF1E1-BLOC1S5C9J1V9 151 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 PRYO14603 147 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 GPR171O14626 319 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 EEF1E1O43324 174 aaKnown RBP7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 TPST2O60704 377 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 TIPRLO75663 272 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 AQP8O94778 261 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 TOXO94900 526 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 VAMP5O95183 116 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 HIST1H2ABP04908 130 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 NHLRC4P0CG21 123 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 RBM34P42696 430 aaKnown RBP7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 RPS5P46782 204 aaKnown RBP7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 YAP1P46937 504 aaKnown RBP7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 GTF2A1P52655 376 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 SMIM11AP58511 58 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 SIRPAP78324 504 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 IL1RL1Q01638 556 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 TRAM2Q15035 370 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 ATP6AP1Q15904 470 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 OTUD3Q5T2D3 398 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 FAM69AQ5T7M9 428 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 TMEM225Q6GV28 225 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 PAQR6Q6TCH4 344 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 PLXDC2Q6UX71 529 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 ZBTB49Q6ZSB9 765 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 HIST3H2AQ7L7L0 130 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 RRM2BQ7LG56 351 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 CDK20Q8IZL9 346 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 OR6K3Q8NGY3 331 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 OR6S1Q8NH40 331 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 MFSD8Q8NHS3 518 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 RNF128Q8TEB7 428 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 HIST1H2ACQ93077 130 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 SLC25A36Q96CQ1 311 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 DNAJA3Q96EY1 480 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 C18orf12Q96KH6 178 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 COG8Q96MW5 612 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 WFDC6Q9BQY6 131 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 CHID1Q9BWS9 393 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 RSPO3Q9BXY4 272 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 SLC19A3Q9BZV2 496 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 SEMA6AQ9H2E6 1030 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 CLEC4AQ9UMR7 237 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 GTF2A1LQ9UNN4 478 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 PROCRQ9UNN8 238 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 ENPP4Q9Y6X5 453 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 V9GYQ6 96 aa7.08□□□□□ -1.28
TRAPPC12-221ENST00000489032 STAB1Q9NY15 2570 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 FN1P02751 2386 aaKnown RBP7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 HTR3EA5X5Y0 456 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 B9A039 149 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 KPNA4O00629 521 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 SMAD9O15198 467 aaKnown RBP7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 DENRO43583 198 aaKnown RBP7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 CYTIPO60759 359 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 SS18L1O75177 396 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 NPIPB7O75200 414 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 AKR7A3O95154 331 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 OR6A2O95222 327 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 MT-ATP6P00846 226 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 FABP3P05413 133 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 HEXAP06865 529 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 YES1P07947 543 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 ASCL1P50553 236 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 AQP4P55087 323 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 PDK3Q15120 406 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 SMN1Q16637 294 aaKnown RBP7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 KRTAP15-1Q3LI76 137 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 ZNF813Q6ZN06 617 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 OFCC1Q8IZS5 231 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 NAXEQ8NCW5 288 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 ABHD3Q8WU67 409 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 TMEM239Q8WW34 195 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 KTI12Q96EK9 354 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 ZNF300Q96RE9 604 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 ZNF347Q96SE7 839 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 SEPHS2Q99611 448 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 SF3B5Q9BWJ5 86 aaKnown RBP7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 PRDM13Q9H4Q3 707 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 ANKRD19PQ9H560 264 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 KRCC1Q9NPI7 259 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 KLHL13Q9P2N7 655 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 DNAJB9Q9UBS3 223 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 A4GNTQ9UNA3 340 aa7.07□□□□□ -1.28
TRAPPC12-221ENST00000489032 RASD1Q9Y272 281 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms