RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 PLBD1Q6P4A8 553 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 SLC22A25Q6T423 547 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 ZNF584Q8IVC4 421 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 CCDC36Q8IYA8 594 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 BBS1Q8NFJ9 593 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 OR6K6Q8NGW6 343 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 OR2T4Q8NH00 348 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 AKR7LQ8NHP1 331 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 PLEKHA8Q96JA3 519 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 ZNF75AQ96N20 296 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 MBOAT4Q96T53 435 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 TOR3AQ9H497 397 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 RNF121Q9H920 327 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 CCNB1IP1Q9NPC3 277 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 MRPL22Q9NWU5 206 aaKnown RBP9.6□□□□□ -0.87
UBE4B-210ENST00000488228 TVP23BQ9NYZ1 205 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 ASH2LQ9UBL3 628 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 NKX1-2Q9UD57 310 aaPredicted RBP9.6□□□□□ -0.87
UBE4B-210ENST00000488228 ENOPH1Q9UHY7 261 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 MOKQ9UQ07 419 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 ORC6Q9Y5N6 252 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 IGHV2OR16-5A0A0B4J2B6 119 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 PRR23D1E9PI22 279 aaPredicted RBP9.59□□□□□ -0.87
UBE4B-210ENST00000488228 H0YHG0 523 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 SNAP29O95721 258 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 TFP02787 698 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 HMGN1P05114 100 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 PRR23D2P0DMB1 279 aaPredicted RBP9.59□□□□□ -0.87
UBE4B-210ENST00000488228 PAICSP22234 425 aaKnown RBP9.59□□□□□ -0.87
UBE4B-210ENST00000488228 RPS27P42677 84 aaKnown RBP9.59□□□□□ -0.87
UBE4B-210ENST00000488228 GUCA1AP43080 201 aaPredicted RBP9.59□□□□□ -0.87
UBE4B-210ENST00000488228 NAAAQ02083 359 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 HSF2Q03933 536 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 SNAPC1Q16533 368 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 C1QTNF12Q5T7M4 302 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 ZNF774Q6NX45 483 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 CORO6Q6QEF8 472 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 ZBTB49Q6ZSB9 765 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 CXXC5Q7LFL8 322 aaKnown RBP9.59□□□□□ -0.87
UBE4B-210ENST00000488228 CPOQ8IVL8 374 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 LINC00346Q8IVM7 164 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 GALNT4Q8N4A0 578 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 PAQR4Q8N4S7 273 aaPredicted RBP9.59□□□□□ -0.87
UBE4B-210ENST00000488228 FAM169BQ8N8A8 192 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 RADILQ96JH8 1075 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 LURAP1Q96LR2 239 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 OR2H1Q9GZK4 316 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 WNT5BQ9H1J7 359 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 KCNN2Q9H2S1 579 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 LIME1Q9H400 295 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 LHFPL6Q9Y693 200 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 COMMD3-BMI1R4GMX3 469 aa9.59□□□□□ -0.87
UBE4B-210ENST00000488228 MYO9AB2RTY4 2548 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 C12orf71A8MTZ7 269 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 DOK2O60496 412 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 CCL2P13500 99 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 SLC2A5P22732 501 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 APEX1P27695 318 aaKnown RBP9.58□□□□□ -0.88
UBE4B-210ENST00000488228 RAD23AP54725 363 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 PSG4Q00888 419 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 TEKQ02763 1124 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 AQP6Q13520 282 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 KCNMB1Q16558 191 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 KLHL12Q53G59 568 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 LINC01590Q5TEZ4 76 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 BCDIN3DQ7Z5W3 292 aaKnown RBP9.58□□□□□ -0.88
UBE4B-210ENST00000488228 DPPA2Q7Z7J5 298 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 ZNF511Q8NB15 262 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 CPEB3Q8NE35 698 aaKnown RBP9.58□□□□□ -0.88
UBE4B-210ENST00000488228 SLC30A7Q8NEW0 376 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 OR10H5Q8NGA6 315 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 LILRB1Q8NHL6 650 aaPredicted RBP9.58□□□□□ -0.88
UBE4B-210ENST00000488228 FAM81AQ8TBF8 368 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 AKAP1Q92667 903 aaKnown RBP eCLIP9.58□□□□□ -0.88
UBE4B-210ENST00000488228 IL4I1Q96RQ9 567 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 KCNS3Q9BQ31 491 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 TEX12Q9BXU0 123 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 PRRG3Q9BZD7 231 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 OR51V1Q9H2C8 321 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 PLEKHF2Q9H8W4 249 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 WDR76Q9H967 626 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 MOV10Q9HCE1 1003 aaKnown RBP9.58□□□□□ -0.88
UBE4B-210ENST00000488228 POU2F3Q9UKI9 436 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 ARFGEF3Q5TH69 2177 aa9.58□□□□□ -0.88
UBE4B-210ENST00000488228 CCDC182A6NF36 153 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 HS3ST1O14792 307 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 CASQ2O14958 399 aaPredicted RBP9.57□□□□□ -0.88
UBE4B-210ENST00000488228 RER1O15258 196 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 CRYAAP02489 173 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 SERPINA5P05154 406 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 SPARCP09486 303 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 GGT2P36268 569 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 HTR5AP47898 357 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 PCBD1P61457 104 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 RPS7P62081 194 aaKnown RBP9.57□□□□□ -0.88
UBE4B-210ENST00000488228 LSM6P62312 80 aaKnown RBP9.57□□□□□ -0.88
UBE4B-210ENST00000488228 ADAM8P78325 824 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 SCRN3Q0VDG4 424 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 APOFQ13790 326 aa9.57□□□□□ -0.88
UBE4B-210ENST00000488228 C3orf36Q3SXR2 165 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms