RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 PPIAP62937 165 aaKnown RBP11.17□□□□□ -0.62
HSPG2-211ENST00000486901 RPS21P63220 83 aaKnown RBP11.17□□□□□ -0.62
HSPG2-211ENST00000486901 BCORP1Q8N888 145 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 OR6K3Q8NGY3 331 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 NANPQ8TBE9 248 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 DCUN1D4Q92564 292 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 ASB16Q96NS5 453 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 TIMM29Q9BSF4 260 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 C20orf24Q9BUV8 137 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 Q9N2J8 555 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 RASL12Q9NYN1 266 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 THAP10Q9P2Z0 257 aaPredicted RBP11.17□□□□□ -0.62
HSPG2-211ENST00000486901 SLC17A4Q9Y2C5 497 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 PRELID3BQ9Y3B1 194 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 ZNF175Q9Y473 711 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 NBASA2RRP1 2371 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 OR14I1A6ND48 311 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 SERINC4A6NH21 518 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 CD14P08571 375 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 SLC2A1P11166 492 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 DHODHQ02127 395 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 EIF2B5Q13144 721 aaKnown RBP11.17□□□□□ -0.62
HSPG2-211ENST00000486901 SLC16A9Q7RTY1 509 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 GTPBP8Q8N3Z3 284 aaPredicted RBP11.17□□□□□ -0.62
HSPG2-211ENST00000486901 FAM160A2Q8N612 972 aaPredicted RBP11.17□□□□□ -0.62
HSPG2-211ENST00000486901 TAAR8Q969N4 342 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 INTS14Q96SY0 518 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.17□□□□□ -0.62
HSPG2-211ENST00000486901 KLK13Q9UKR3 277 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 EDARQ9UNE0 448 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 DHDHQ9UQ10 334 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 PRRC2CQ9Y520 2896 aaKnown RBP11.17□□□□□ -0.62
HSPG2-211ENST00000486901 URADA6NGE7 173 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 FBXO24O75426 580 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 ZNF205O95201 554 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 HTR3BO95264 441 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 GLI4P10075 376 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 GNB3P16520 340 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 GPR143P51810 404 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 FMODQ06828 376 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 RUNX3Q13761 415 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 C16orf47Q6ZP98 133 aaPredicted RBP11.17□□□□□ -0.62
HSPG2-211ENST00000486901 SHISA6Q6ZSJ9 500 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 RAB7BQ96AH8 199 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 SLC41A2Q96JW4 573 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 SMIM3Q9BZL3 60 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 DNTTIP1Q9H147 329 aa11.17□□□□□ -0.62
HSPG2-211ENST00000486901 SPTA1P02549 2419 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 RNF222A6NCQ9 220 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 K7EQS6 105 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 NKX2-2O95096 273 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 DAOP14920 347 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 EGR4Q05215 589 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 ILF3Q12906 894 aaKnown RBP eCLIP11.16□□□□□ -0.62
HSPG2-211ENST00000486901 RSPO4Q2I0M5 234 aaPredicted RBP11.16□□□□□ -0.62
HSPG2-211ENST00000486901 RBMS3Q6XE24 437 aaKnown RBP11.16□□□□□ -0.62
HSPG2-211ENST00000486901 THAP3Q8WTV1 239 aaPredicted RBP11.16□□□□□ -0.62
HSPG2-211ENST00000486901 MMABQ96EY8 250 aaPredicted RBP11.16□□□□□ -0.62
HSPG2-211ENST00000486901 TMPRSS13Q9BYE2 586 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 A0A1W2PPC1 479 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 OR6C65A6NJZ3 312 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 SULT1B1O43704 296 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 GP1BAP07359 652 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 ERCC1P07992 297 aaPredicted RBP11.16□□□□□ -0.62
HSPG2-211ENST00000486901 CT45A8P0DMV1 189 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 CT45A9P0DMV2 189 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 ALOX5APP20292 161 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 CSF2RBP32927 897 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 DNASE1L1P49184 302 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 CT45A2Q5DJT8 189 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 C11orf87Q6NUJ2 197 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 TMEM17Q86X19 198 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 COMMD2Q86X83 199 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 INO80EQ8NBZ0 244 aaPredicted RBP11.16□□□□□ -0.62
HSPG2-211ENST00000486901 OR13C8Q8NGS7 320 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 PELOQ9BRX2 385 aaKnown RBP11.16□□□□□ -0.62
HSPG2-211ENST00000486901 ZNF426Q9BUY5 554 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 EMC3Q9P0I2 261 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 DHCR7Q9UBM7 475 aaKnown RBP11.16□□□□□ -0.62
HSPG2-211ENST00000486901 P2RY10O00398 339 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 XKRYO14609 159 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 ZNF806P0C7X5 589 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 MGMTP16455 207 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 ZNF10P21506 573 aaPredicted RBP11.16□□□□□ -0.62
HSPG2-211ENST00000486901 HRH1P35367 487 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 ARRB1P49407 418 aaPredicted RBP11.16□□□□□ -0.62
HSPG2-211ENST00000486901 ZP2Q05996 745 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 ZNF74Q16587 644 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 HFEQ30201 348 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 SLC29A4Q7RTT9 530 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 SAMD14Q8IZD0 417 aaPredicted RBP11.16□□□□□ -0.62
HSPG2-211ENST00000486901 ZNF417Q8TAU3 575 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 METTL21AQ8WXB1 218 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 CSAG2Q9Y5P2 127 aa11.16□□□□□ -0.62
HSPG2-211ENST00000486901 DOCK8Q8NF50 2099 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 TRBV23-1A0A0A0MS06 115 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 ABHD16AO95870 558 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 SERPINA5P05154 406 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 CRYBA1P05813 215 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 HLA-DOBP13765 273 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms