RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 CHN2P52757 468 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 GABARAPL2P60520 117 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 HIST1H3AP68431 136 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 SRSF1Q07955 248 aaKnown RBP eCLIP8.37□□□□□ -1.07
MCF2L-227ENST00000486806 SGCAQ16586 387 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 KCTD21Q4G0X4 260 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 HIST2H3PS2Q5TEC6 136 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 SEZ6L2Q6UXD5 910 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 CLEC18BQ6UXF7 455 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 AHSA2Q719I0 299 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 HIST2H3AQ71DI3 136 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 SLC16A14Q7RTX9 510 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 DPY19L4Q7Z388 723 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.37□□□□□ -1.07
MCF2L-227ENST00000486806 SYT9Q86SS6 491 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 SKA3Q8IX90 412 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 SLC35F2Q8IXU6 374 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 LRRC18Q8N456 261 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 RFLNBQ8N5W9 214 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 WDR31Q8NA23 367 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 CLEC18CQ8NCF0 446 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 OR10H5Q8NGA6 315 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 OR52I1Q8NGK6 324 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 OTOSQ8NHW6 89 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 FGFBP3Q8TAT2 258 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 ST7LQ8TDW4 575 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 SMAP2Q8WU79 429 aaPredicted RBP8.37□□□□□ -1.07
MCF2L-227ENST00000486806 IPCEF1Q8WWN9 437 aaPredicted RBP8.37□□□□□ -1.07
MCF2L-227ENST00000486806 SGCDQ92629 289 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 RNASE6Q93091 150 aaKnown RBP8.37□□□□□ -1.07
MCF2L-227ENST00000486806 S100PBPQ96BU1 408 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 MNTQ99583 582 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF649Q9BS31 505 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 WACQ9BTA9 647 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 HDHD5Q9BXW7 423 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 YTHDF1Q9BYJ9 559 aaKnown RBP8.37□□□□□ -1.07
MCF2L-227ENST00000486806 YIPF3Q9GZM5 350 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 DUSP21Q9H596 190 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 NOX3Q9HBY0 568 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 FGF20Q9NP95 211 aaPredicted RBP8.37□□□□□ -1.07
MCF2L-227ENST00000486806 PNRC2Q9NPJ4 139 aaKnown RBP8.37□□□□□ -1.07
MCF2L-227ENST00000486806 SLC17A5Q9NRA2 495 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 B3GNT2Q9NY97 397 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 GDF2Q9UK05 429 aaPredicted RBP8.37□□□□□ -1.07
MCF2L-227ENST00000486806 BLOC1S6Q9UL45 172 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 DIMT1Q9UNQ2 313 aaKnown RBP8.37□□□□□ -1.07
MCF2L-227ENST00000486806 MYRFQ9Y2G1 1151 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 KLHDC2Q9Y2U9 406 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 NBASA2RRP1 2371 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 UBR5O95071 2799 aaPredicted RBP8.37□□□□□ -1.07
MCF2L-227ENST00000486806 ALPK2Q86TB3 2170 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 A0A1W2PQL4 384 aaPredicted RBP8.36□□□□□ -1.07
MCF2L-227ENST00000486806 CIB4A0PJX0 185 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 IRGMA1A4Y4 181 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 C12orf71A8MTZ7 269 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 PRR32B1ATL7 298 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 C16orf97H3BN30 126 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 UBL3O95164 117 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 RAB36O95755 333 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 FADS2O95864 444 aaKnown RBP8.36□□□□□ -1.07
MCF2L-227ENST00000486806 HLA-HP01893 362 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 CDK1P06493 297 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 HTR1AP08908 422 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 OR2T7P0C7T2 308 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF823P16415 610 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 ALOX5APP20292 161 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 IL32P24001 234 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 GUCA1AP43080 201 aaPredicted RBP8.36□□□□□ -1.07
MCF2L-227ENST00000486806 ACTC1P68032 377 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 ACTA1P68133 377 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 SORDQ00796 357 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 MVKQ03426 396 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 KLHL22Q53GT1 634 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 TIMM23BQ5SRD1 257 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 C1QTNF12Q5T7M4 302 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 CORO6Q6QEF8 472 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 CFAP77Q6ZQR2 320 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 SSX6Q7RTT6 188 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 DPPA2Q7Z7J5 298 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 LINC00346Q8IVM7 164 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 CCDC36Q8IYA8 594 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF454Q8N9F8 522 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF540Q8NDQ6 660 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 STEAP2Q8NFT2 490 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 OR10S1Q8NGN2 331 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 OR2T27Q8NH04 317 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 NANOS1Q8WY41 292 aaKnown RBP8.36□□□□□ -1.07
MCF2L-227ENST00000486806 MAP6Q96JE9 813 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF75AQ96N20 296 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 NR1H4Q96RI1 486 aaPredicted RBP8.36□□□□□ -1.07
MCF2L-227ENST00000486806 AMELYQ99218 206 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 USB1Q9BQ65 265 aaKnown RBP8.36□□□□□ -1.07
MCF2L-227ENST00000486806 COPS4Q9BT78 406 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 ACTR6Q9GZN1 396 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF696Q9H7X3 374 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 OBP2BQ9NPH6 170 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 KCNJ16Q9NPI9 418 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 NPDC1Q9NQX5 325 aaPredicted RBP8.36□□□□□ -1.07
MCF2L-227ENST00000486806 INPP5EQ9NRR6 644 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 DDX28Q9NUL7 540 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms