RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 FOXN4Q96NZ1 517 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 ZNF416Q9BWM5 594 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 EMC7Q9NPA0 242 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 IL1RAPQ9NPH3 570 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 SLCO1C1Q9NYB5 712 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 TAAR3PQ9P1P4 343 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 MYEF2Q9P2K5 600 aaKnown RBP11.07□□□□□ -0.64
CHMP3-208ENST00000486404 ADAM21Q9UKJ8 722 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 NDRG4Q9ULP0 352 aaKnown RBP11.07□□□□□ -0.64
CHMP3-208ENST00000486404 TIMM10BQ9Y5J6 103 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 IER3IP1Q9Y5U9 82 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 VWC2LB2RUY7 222 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 SLC16A7O60669 478 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 KHDRBS3O75525 346 aaKnown RBP11.06□□□□□ -0.64
CHMP3-208ENST00000486404 NAT2P11245 290 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 CTLA4P16410 223 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 ZNF26P17031 533 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-208ENST00000486404 NOS3P29474 1203 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 GCH1P30793 250 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 CENPAP49450 140 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 GZMKP49863 264 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 ARHGDIAP52565 204 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 CHN2P52757 468 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 PSG4Q00888 419 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 SPATA46Q5T0L3 261 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 CYB5R2Q6BCY4 276 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 ZNF774Q6NX45 483 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 ARL9Q6T311 187 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 THSD4Q6ZMP0 1018 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 DHFR2Q86XF0 187 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 GLB1L2Q8IW92 636 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 CPEB3Q8NE35 698 aaKnown RBP11.06□□□□□ -0.64
CHMP3-208ENST00000486404 OR52L1Q8NGH7 329 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 ABHD4Q8TB40 342 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 CCDC124Q96CT7 223 aaKnown RBP11.06□□□□□ -0.64
CHMP3-208ENST00000486404 LRGUKQ96M69 825 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 ERMAPQ96PL5 475 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-208ENST00000486404 IFT27Q9BW83 186 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 WNT5BQ9H1J7 359 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 OR52D1Q9H346 318 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 NRIP3Q9NQ35 241 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 ACTR3BQ9P1U1 418 aa11.06□□□□□ -0.64
CHMP3-208ENST00000486404 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.06□□□□□ -0.64
CHMP3-208ENST00000486404 IGHV4-61A0A0C4DH41 118 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 TPD52L2O43399 206 aaKnown RBP11.05□□□□□ -0.64
CHMP3-208ENST00000486404 PTP4A3O75365 173 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 CRLF1O75462 422 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 KRT36O76013 467 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 ABHD16AO95870 558 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 CLPTM1O96005 669 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 RENP00797 406 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 IGHV4-31P0DP07 118 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 ZNF250P15622 560 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 ZNF23P17027 643 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 HTR5AP47898 357 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 AQP6Q13520 282 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 ENDOGQ14249 297 aaKnown RBP11.05□□□□□ -0.64
CHMP3-208ENST00000486404 MOGQ16653 247 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 PCGF3Q3KNV8 242 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 FAM98BQ52LJ0 330 aaKnown RBP11.05□□□□□ -0.64
CHMP3-208ENST00000486404 LEG1Q6P5S2 330 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 RFPL4BQ6ZWI9 263 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.05□□□□□ -0.64
CHMP3-208ENST00000486404 SYT9Q86SS6 491 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 ZNF101Q8IZC7 436 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 ZNF786Q8N393 782 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 POM121L2Q96KW2 1035 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 SNX18Q96RF0 628 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 FUZQ9BT04 418 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 WACQ9BTA9 647 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 TRIM15Q9C019 465 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 ELOVL3Q9HB03 270 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 HINT3Q9NQE9 182 aaKnown RBP11.05□□□□□ -0.64
CHMP3-208ENST00000486404 VSX1Q9NZR4 365 aaPredicted RBP11.05□□□□□ -0.64
CHMP3-208ENST00000486404 PRPF19Q9UMS4 504 aaKnown RBP11.05□□□□□ -0.64
CHMP3-208ENST00000486404 JMJD1CQ15652 2540 aa11.05□□□□□ -0.64
CHMP3-208ENST00000486404 ABCA2Q9BZC7 2435 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 IGLV3-9A0A075B6K5 115 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 LOC100509620A0A075B734 347 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 PLSCR5A0PG75 271 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 TNFRSF11BO00300 401 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 SGCEO43556 437 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 GSTM3P21266 225 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 GIFP27352 417 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 CRABP1P29762 137 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 WNT5AP41221 380 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 FXYD6P3P58550 94 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 PPP1CBP62140 327 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 ZNF718Q3SXZ3 478 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 CHRFAM7AQ494W8 412 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 FAM166AQ6J272 317 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 LCN8Q6JVE9 175 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 RPL13AP3Q6NVV1 102 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 PGM2L1Q6PCE3 622 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 UGT2A3Q6UWM9 527 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 ZNF620Q6ZNG0 422 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 RINLQ6ZS11 566 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 PTCHD4Q6ZW05 846 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 ZER1Q7Z7L7 766 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 C1orf174Q8IYL3 243 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms