RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 C10orf82Q8WW14 230 aa16.12■□□□□ 0.17
CHRD-216ENST00000486066 RBM4BQ9BQ04 359 aaKnown RBP16.12■□□□□ 0.17
CHRD-216ENST00000486066 OR2H1Q9GZK4 316 aa16.12■□□□□ 0.17
CHRD-216ENST00000486066 EIF3KQ9UBQ5 218 aaKnown RBP16.12■□□□□ 0.17
CHRD-216ENST00000486066 NPIPB13A6NJU9 1138 aa16.11■□□□□ 0.17
CHRD-216ENST00000486066 NPIPB4C9JG80 1138 aa16.11■□□□□ 0.17
CHRD-216ENST00000486066 UBDO15205 165 aa16.11■□□□□ 0.17
CHRD-216ENST00000486066 SERPINB7O75635 380 aa16.11■□□□□ 0.17
CHRD-216ENST00000486066 AQP1P29972 269 aa16.11■□□□□ 0.17
CHRD-216ENST00000486066 MDH2P40926 338 aaKnown RBP16.11■□□□□ 0.17
CHRD-216ENST00000486066 GDI2P50395 445 aaKnown RBP16.11■□□□□ 0.17
CHRD-216ENST00000486066 PAGE3Q5JUK9 113 aa16.11■□□□□ 0.17
CHRD-216ENST00000486066 CEP85LQ5SZL2 805 aa16.11■□□□□ 0.17
CHRD-216ENST00000486066 FAM205BPQ63HN1 556 aa16.11■□□□□ 0.17
CHRD-216ENST00000486066 NXNQ6DKJ4 435 aa16.11■□□□□ 0.17
CHRD-216ENST00000486066 SLC25A47Q6Q0C1 308 aa16.11■□□□□ 0.17
CHRD-216ENST00000486066 LRRN1Q6UXK5 716 aa16.11■□□□□ 0.17
CHRD-216ENST00000486066 FOXL2NBQ6ZUU3 175 aa16.11■□□□□ 0.17
CHRD-216ENST00000486066 SMYD1Q8NB12 490 aa16.11■□□□□ 0.17
CHRD-216ENST00000486066 HIPK4Q8NE63 616 aa16.11■□□□□ 0.17
CHRD-216ENST00000486066 POFUT1Q9H488 388 aa16.11■□□□□ 0.17
CHRD-216ENST00000486066 IL19Q9UHD0 177 aa16.11■□□□□ 0.17
CHRD-216ENST00000486066 CLPSL1A2RUU4 121 aa16.1■□□□□ 0.17
CHRD-216ENST00000486066 TMEM178BH3BS89 294 aa16.1■□□□□ 0.17
CHRD-216ENST00000486066 M0QZ24 198 aa16.1■□□□□ 0.17
CHRD-216ENST00000486066 ERLIN1O75477 346 aa16.1■□□□□ 0.17
CHRD-216ENST00000486066 KITP10721 976 aa16.1■□□□□ 0.17
CHRD-216ENST00000486066 SELEP16581 610 aa16.1■□□□□ 0.17
CHRD-216ENST00000486066 KITLGP21583 273 aa16.1■□□□□ 0.17
CHRD-216ENST00000486066 ERVK-25P63136 954 aa16.1■□□□□ 0.17
CHRD-216ENST00000486066 FMODQ06828 376 aa16.1■□□□□ 0.17
CHRD-216ENST00000486066 KRT71Q3SY84 523 aa16.1■□□□□ 0.17
CHRD-216ENST00000486066 TTC33Q6PID6 262 aaPredicted RBP16.1■□□□□ 0.17
CHRD-216ENST00000486066 Q6YL49 198 aa16.1■□□□□ 0.17
CHRD-216ENST00000486066 C17orf107Q6ZR85 190 aa16.1■□□□□ 0.17
CHRD-216ENST00000486066 PTOV1Q86YD1 416 aa16.1■□□□□ 0.17
CHRD-216ENST00000486066 MREGQ8N565 214 aa16.1■□□□□ 0.17
CHRD-216ENST00000486066 HDAC2Q92769 488 aaKnown RBP16.1■□□□□ 0.17
CHRD-216ENST00000486066 MPP4Q96JB8 637 aa16.1■□□□□ 0.17
CHRD-216ENST00000486066 SSBP3Q9BWW4 388 aaPredicted RBP16.1■□□□□ 0.17
CHRD-216ENST00000486066 TMEM165Q9HC07 324 aa16.1■□□□□ 0.17
CHRD-216ENST00000486066 CCNB1IP1Q9NPC3 277 aa16.1■□□□□ 0.17
CHRD-216ENST00000486066 KIR2DS1A0A191URI9 304 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 CPSF4LA6NMK7 179 aaKnown RBP16.09■□□□□ 0.17
CHRD-216ENST00000486066 KPNA4O00629 521 aaPredicted RBP16.09■□□□□ 0.17
CHRD-216ENST00000486066 TIMM23O14925 209 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 RGS16O15492 202 aaPredicted RBP16.09■□□□□ 0.17
CHRD-216ENST00000486066 CLPXO76031 633 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 FSTL3O95633 263 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 F13BP05160 661 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 TNFRSF1AP19438 455 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 PPIBP23284 216 aaKnown RBP16.09■□□□□ 0.17
CHRD-216ENST00000486066 SLC6A2P23975 617 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 MMP16P51512 607 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 FBLN7Q53RD9 439 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 BRICD5Q6PL45 260 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 BLOC1S3Q6QNY0 202 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 FIP1L1Q6UN15 594 aaKnown RBP16.09■□□□□ 0.17
CHRD-216ENST00000486066 NANOGNBQ7Z5D8 188 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 MUC20Q8N307 709 aaPredicted RBP16.09■□□□□ 0.17
CHRD-216ENST00000486066 TMEM86BQ8N661 226 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 OR10S1Q8NGN2 331 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 ITLN1Q8WWA0 313 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 LIPHQ8WWY8 451 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 RAB40AQ8WXH6 277 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 C4orf45Q96LM5 186 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 CCT8L2Q96SF2 557 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 CHIAQ9BZP6 476 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 GCM1Q9NP62 436 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 SLC7A7Q9UM01 511 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 PPP1R3CQ9UQK1 317 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 DNAH9Q9NYC9 4486 aa16.09■□□□□ 0.17
CHRD-216ENST00000486066 TRAPPC13A5PLN9 417 aa16.08■□□□□ 0.16
CHRD-216ENST00000486066 BLOC1S5-TXNDC5H3BN57 136 aa16.08■□□□□ 0.16
CHRD-216ENST00000486066 IGF2P01344 180 aa16.08■□□□□ 0.16
CHRD-216ENST00000486066 CST2P09228 141 aa16.08■□□□□ 0.16
CHRD-216ENST00000486066 THRBP10828 461 aa16.08■□□□□ 0.16
CHRD-216ENST00000486066 BRD3OSQ6XYD6 125 aa16.08■□□□□ 0.16
CHRD-216ENST00000486066 ZER1Q7Z7L7 766 aa16.08■□□□□ 0.16
CHRD-216ENST00000486066 KCNN2Q9H2S1 579 aa16.08■□□□□ 0.16
CHRD-216ENST00000486066 ELOVL3Q9HB03 270 aa16.08■□□□□ 0.16
CHRD-216ENST00000486066 NOX4Q9NPH5 578 aa16.08■□□□□ 0.16
CHRD-216ENST00000486066 MAN2C1Q9NTJ4 1040 aa16.08■□□□□ 0.16
CHRD-216ENST00000486066 TBCCD1Q9NVR7 557 aa16.08■□□□□ 0.16
CHRD-216ENST00000486066 SLC13A4Q9UKG4 626 aa16.08■□□□□ 0.16
CHRD-216ENST00000486066 A0A1W2PRG6 482 aa16.07■□□□□ 0.16
CHRD-216ENST00000486066 TIMM8AO60220 97 aaPredicted RBP16.07■□□□□ 0.16
CHRD-216ENST00000486066 TGDSO95455 350 aa16.07■□□□□ 0.16
CHRD-216ENST00000486066 CD247P20963 164 aa16.07■□□□□ 0.16
CHRD-216ENST00000486066 LAP3P28838 519 aa16.07■□□□□ 0.16
CHRD-216ENST00000486066 DAP3P51398 398 aaKnown RBP16.07■□□□□ 0.16
CHRD-216ENST00000486066 PROK1P58294 105 aa16.07■□□□□ 0.16
CHRD-216ENST00000486066 RPL15P61313 204 aaKnown RBP16.07■□□□□ 0.16
CHRD-216ENST00000486066 ENDOGQ14249 297 aaKnown RBP16.07■□□□□ 0.16
CHRD-216ENST00000486066 BTNL3Q6UXE8 466 aa16.07■□□□□ 0.16
CHRD-216ENST00000486066 HDDC2Q7Z4H3 204 aa16.07■□□□□ 0.16
CHRD-216ENST00000486066 KLBQ86Z14 1044 aa16.07■□□□□ 0.16
CHRD-216ENST00000486066 FITM2Q8N6M3 262 aa16.07■□□□□ 0.16
CHRD-216ENST00000486066 OR2Z1Q8NG97 314 aa16.07■□□□□ 0.16
CHRD-216ENST00000486066 THOC1Q96FV9 657 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms