RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 FAM3DQ96BQ1 224 aa1.65□□□□□ -2.15
GCFC2-209ENST00000486016 DUS3LQ96G46 650 aaKnown RBP1.65□□□□□ -2.15
GCFC2-209ENST00000486016 BMFQ96LC9 184 aa1.65□□□□□ -2.15
GCFC2-209ENST00000486016 NEUROG2Q9H2A3 272 aa1.65□□□□□ -2.15
GCFC2-209ENST00000486016 LINC00597Q9H2U6 94 aa1.65□□□□□ -2.15
GCFC2-209ENST00000486016 NOX3Q9HBY0 568 aa1.65□□□□□ -2.15
GCFC2-209ENST00000486016 ZDHHC4Q9NPG8 344 aa1.65□□□□□ -2.15
GCFC2-209ENST00000486016 KCNJ16Q9NPI9 418 aa1.65□□□□□ -2.15
GCFC2-209ENST00000486016 DCAF16Q9NXF7 216 aa1.65□□□□□ -2.15
GCFC2-209ENST00000486016 ZNF629Q9UEG4 869 aaPredicted RBP1.65□□□□□ -2.15
GCFC2-209ENST00000486016 PSG8Q9UQ74 426 aa1.65□□□□□ -2.15
GCFC2-209ENST00000486016 GOLT1BQ9Y3E0 138 aa1.65□□□□□ -2.15
GCFC2-209ENST00000486016 MN1Q10571 1320 aaPredicted RBP1.65□□□□□ -2.15
GCFC2-209ENST00000486016 IGHV3-66A0A0C4DH42 116 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 SMCO2A6NFE2 343 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 C9JVG2 144 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 INS-IGF2F8WCM5 200 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 AIM2O14862 343 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 LSM1O15116 133 aaKnown RBP1.64□□□□□ -2.15
GCFC2-209ENST00000486016 EIF3HO15372 352 aaKnown RBP eCLIP1.64□□□□□ -2.15
GCFC2-209ENST00000486016 DPM1O60762 260 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 SPAG7O75391 227 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 SRP72O76094 671 aaKnown RBP1.64□□□□□ -2.15
GCFC2-209ENST00000486016 FTH1P02794 183 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 SERPINA5P05154 406 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 FABP3P05413 133 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 PRPS2P11908 318 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 FOXN2P32314 431 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 MAS1LP35410 378 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 CDKN2BP42772 138 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 CYB561P49447 251 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 ADARB1P78563 741 aaKnown RBP1.64□□□□□ -2.15
GCFC2-209ENST00000486016 SLC25A11Q02978 314 aaKnown RBP1.64□□□□□ -2.15
GCFC2-209ENST00000486016 MXD1Q05195 221 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 TWF1Q12792 350 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 CUL2Q13617 745 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 CHRNA6Q15825 494 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 ALKBH6Q3KRA9 238 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 SOHLH1Q5JUK2 328 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 PPM1LQ5SGD2 360 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 CCNJQ5T5M9 372 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 PRR9Q5T870 116 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 C9orf135Q5VTT2 229 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 CARD17Q5XLA6 110 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 METAP1DQ6UB28 335 aaPredicted RBP1.64□□□□□ -2.15
GCFC2-209ENST00000486016 CERS6Q6ZMG9 384 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 FAM92BQ6ZTR7 304 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 NCCRP1Q6ZVX7 275 aaPredicted RBP1.64□□□□□ -2.15
GCFC2-209ENST00000486016 ABHD13Q7L211 337 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 HDDC2Q7Z4H3 204 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 OAFQ86UD1 273 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 BBS5Q8N3I7 341 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 FAM86B1Q8N7N1 296 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 OR10G4Q8NGN3 311 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 OR4S2Q8NH73 311 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 SLC38A4Q969I6 547 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 SERPINB12Q96P63 405 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 CHAC1Q9BUX1 264 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 FAM192AQ9GZU8 254 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 NEK6Q9HC98 313 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 SAMSN1Q9NSI8 373 aaKnown RBP1.64□□□□□ -2.15
GCFC2-209ENST00000486016 PITPNC1Q9UKF7 332 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 ST3GAL6Q9Y274 331 aa1.64□□□□□ -2.15
GCFC2-209ENST00000486016 NSD2O96028 1365 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 NINLQ9Y2I6 1382 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 IGHV5-51A0A0C4DH38 117 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 TRBV11-1A0A0K0K1C0 115 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 ZNF233A6NK53 670 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 ENTPD5O75356 428 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 RAB3DO95716 219 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 AGTP01019 485 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 KRT14P02533 472 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 ACSM4P0C7M7 580 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 RRM2P31350 389 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 CEACAM6P40199 344 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 ZNF138P52744 262 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 MEF2BQ02080 365 aaPredicted RBP1.63□□□□□ -2.15
GCFC2-209ENST00000486016 GINS1Q14691 196 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 RCN1Q15293 331 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 PTPN20Q4JDL3 420 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 C22orf42Q6IC83 251 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 REEP3Q6NUK4 255 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 DNAJC24Q6P3W2 148 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 SLC16A14Q7RTX9 510 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 IQCKQ8N0W5 287 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 ARRDC1Q8N5I2 433 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 C15orf56Q8N910 161 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 PRELID2Q8N945 189 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 OR10J6PQ8NGY7 276 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 CREB3L1Q96BA8 519 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 OR5B12Q96R08 314 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 PANX1Q96RD7 426 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 C20orf24Q9BUV8 137 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 ZNF160Q9HCG1 818 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 GPATCH2LQ9NWQ4 482 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 UXTQ9UBK9 157 aaPredicted RBP1.63□□□□□ -2.15
GCFC2-209ENST00000486016 OR12D3Q9UGF7 316 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 VANGL2Q9ULK5 521 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 AKNAQ7Z591 1439 aa1.63□□□□□ -2.15
GCFC2-209ENST00000486016 IGHV3-74A0A0B4J1X5 117 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms