RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 BSPH1Q075Z2 132 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 AQP6Q13520 282 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 CRMP1Q14194 572 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 MOGQ16653 247 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 LCN1P1Q5VSP4 162 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 TTC23Q5W5X9 447 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 ACSM5Q6NUN0 579 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 ADAM5Q6NVV9 412 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 PTCHD4Q6ZW05 846 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 SHFQ7M4L6 423 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 MDP1Q86V88 176 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 GID4Q8IVV7 300 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 OR6V1Q8N148 313 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 CYB561A3Q8NBI2 242 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 OR8D4Q8NGM9 314 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 OR8J1Q8NGP2 316 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 OR6K6Q8NGW6 343 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 OR4Q3Q8NH05 313 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 POM121Q96HA1 1249 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 COG8Q96MW5 612 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 C1QTNF6Q9BXI9 259 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 OR51V1Q9H2C8 321 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 CDH20Q9HBT6 801 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 TUBG2Q9NRH3 451 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 B3GNT2Q9NY97 397 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 GPR160Q9UJ42 338 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 UGT2A1Q9Y4X1 527 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 TMEM14AQ9Y6G1 99 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 ATP23Q9Y6H3 246 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 HEATR1Q9H583 2144 aaKnown RBP7.21□□□□□ -1.26
SF3A1-208ENST00000485618 SPG11Q96JI7 2443 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 IGLV1-36A0A0B4J1U3 117 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 A0A1W2PR80 420 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 FAM221AA4D161 298 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 DPRXA6NFQ7 191 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 SLC22A31A6NKX4 558 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 DEFB108AA8MXU0 73 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 TLX2O43763 284 aaPredicted RBP7.2□□□□□ -1.26
SF3A1-208ENST00000485618 SEC14L2O76054 403 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 GLCEO94923 617 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 IGLV1-44P01699 117 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 APOC1P02654 83 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 IGFBP1P08833 259 aaPredicted RBP7.2□□□□□ -1.26
SF3A1-208ENST00000485618 COX5BP10606 129 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 SPI1P17947 270 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 STOMP27105 288 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 GSTT1P30711 240 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 SLC15A1P46059 708 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 ART1P52961 327 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 NUDT6P53370 316 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 ADAM8P78325 824 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 POU4F2Q12837 409 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 TMED1Q13445 227 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 TAF13Q15543 124 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 KLHL12Q53G59 568 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 MEDAGQ5VYS4 303 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 SLX4IPQ5VYV7 408 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 PLBD1Q6P4A8 553 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 ZNF704Q6ZNC4 412 aaPredicted RBP7.2□□□□□ -1.26
SF3A1-208ENST00000485618 CXXC5Q7LFL8 322 aaKnown RBP7.2□□□□□ -1.26
SF3A1-208ENST00000485618 CDC20BQ86Y33 519 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 CPOQ8IVL8 374 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 FBXL14Q8N1E6 418 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 IQCF1Q8N6M8 205 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 ZNF454Q8N9F8 522 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 SLC30A7Q8NEW0 376 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 OR5L1Q8NGL2 311 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 TMEM163Q8TC26 289 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 C11orf40Q8WZ69 217 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 FBXW5Q969U6 566 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 SPTSSAQ969W0 71 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 NABP1Q96AH0 204 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 DCLRE1CQ96SD1 692 aaKnown RBP7.2□□□□□ -1.26
SF3A1-208ENST00000485618 MNTQ99583 582 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 ZNF416Q9BWM5 594 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 GRIP2Q9C0E4 1043 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 SP140LQ9H930 580 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 RNPEPL1Q9HAU8 725 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 ELOVL3Q9HB03 270 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 SMPD3Q9NY59 655 aaPredicted RBP7.2□□□□□ -1.26
SF3A1-208ENST00000485618 ATPIF1Q9UII2 106 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 TMEFF2Q9UIK5 374 aaPredicted RBP7.2□□□□□ -1.26
SF3A1-208ENST00000485618 GMPPBQ9Y5P6 360 aa7.2□□□□□ -1.26
SF3A1-208ENST00000485618 IGHV1-18A0A0C4DH31 117 aa7.19□□□□□ -1.26
SF3A1-208ENST00000485618 OR6C6A6NF89 314 aa7.19□□□□□ -1.26
SF3A1-208ENST00000485618 ZNF593O00488 134 aaPredicted RBP7.19□□□□□ -1.26
SF3A1-208ENST00000485618 HS3ST1O14792 307 aa7.19□□□□□ -1.26
SF3A1-208ENST00000485618 SGCEO43556 437 aa7.19□□□□□ -1.26
SF3A1-208ENST00000485618 MITFO75030 526 aaPredicted RBP7.19□□□□□ -1.26
SF3A1-208ENST00000485618 MT-ND5P03915 603 aa7.19□□□□□ -1.26
SF3A1-208ENST00000485618 TP53P04637 393 aaPredicted RBP7.19□□□□□ -1.26
SF3A1-208ENST00000485618 ERCC1P07992 297 aaPredicted RBP7.19□□□□□ -1.26
SF3A1-208ENST00000485618 CECR9P0C854 216 aa7.19□□□□□ -1.26
SF3A1-208ENST00000485618 DNASE1P24855 282 aa7.19□□□□□ -1.26
SF3A1-208ENST00000485618 PCSK6P29122 969 aa7.19□□□□□ -1.26
SF3A1-208ENST00000485618 PYCR1P32322 319 aa7.19□□□□□ -1.26
SF3A1-208ENST00000485618 RGS6P49758 472 aa7.19□□□□□ -1.26
SF3A1-208ENST00000485618 ENTPD1P49961 510 aa7.19□□□□□ -1.26
SF3A1-208ENST00000485618 FABP6P51161 128 aa7.19□□□□□ -1.26
SF3A1-208ENST00000485618 CDH11P55287 796 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms