RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 BVESQ8NE79 360 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 OR4F15Q8NGB8 312 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 OR10G2Q8NGC3 310 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 OR9Q2Q8NGE9 314 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 OR52L1Q8NGH7 329 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 FANK1Q8TC84 345 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 SMAP2Q8WU79 429 aaPredicted RBP7.74□□□□□ -1.17
COL8A1-207ENST00000483969 NSMAFQ92636 917 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 NRGNQ92686 78 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 FBXW5Q969U6 566 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 NMD3Q96D46 503 aaKnown RBP7.74□□□□□ -1.17
COL8A1-207ENST00000483969 MBD6Q96DN6 1003 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 DUS3LQ96G46 650 aaKnown RBP7.74□□□□□ -1.17
COL8A1-207ENST00000483969 WACQ9BTA9 647 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 DGCR6LQ9BY27 220 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 SEC61A2Q9H9S3 476 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 ZNF556Q9HAH1 456 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 FAIMQ9NVQ4 179 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 ARMC1Q9NVT9 282 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 BEX4Q9NWD9 120 aaPredicted RBP7.74□□□□□ -1.17
COL8A1-207ENST00000483969 IL20Q9NYY1 176 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 PDP1Q9P0J1 537 aaPredicted RBP7.74□□□□□ -1.17
COL8A1-207ENST00000483969 IL20RAQ9UHF4 553 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 BAIAP2Q9UQB8 552 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 PLEKHA6Q9Y2H5 1048 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 ADAM18Q9Y3Q7 739 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 SPEF1Q9Y4P9 236 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 AP4S1Q9Y587 144 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 ATP23Q9Y6H3 246 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 HEATR5AQ86XA9 2040 aa7.74□□□□□ -1.17
COL8A1-207ENST00000483969 UTP20O75691 2785 aaKnown RBP7.74□□□□□ -1.17
COL8A1-207ENST00000483969 DIDO1Q9BTC0 2240 aaKnown RBP7.74□□□□□ -1.17
COL8A1-207ENST00000483969 DOPEY2Q9Y3R5 2298 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 ARHGAP21Q5T5U3 1957 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 ARRDC5A6NEK1 342 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 C9orf118A6NHY6 69 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 SOCS2O14508 198 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 SLC2A10O95528 541 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 PPP1R3DO95685 299 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 RENP00797 406 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 IGLV1-44P01699 117 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 FCGR1AP12314 374 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 ANXA8P13928 327 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 CD53P19397 219 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 FASP25445 335 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 CRABP1P29762 137 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 PTDSS1P48651 473 aaKnown RBP7.73□□□□□ -1.17
COL8A1-207ENST00000483969 FABP6P51161 128 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 IDH3GP51553 393 aaPredicted RBP7.73□□□□□ -1.17
COL8A1-207ENST00000483969 CDH11P55287 796 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 FXYD6P3P58550 94 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 PCBD1P61457 104 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 KRR1Q13601 381 aaKnown RBP7.73□□□□□ -1.17
COL8A1-207ENST00000483969 DEFB113Q30KQ7 82 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 MESTQ5EB52 335 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 PRR31Q5SQ13 230 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 FAM27BQ5VT28 67 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 AGAP6Q5VW22 663 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 ZNF620Q6ZNG0 422 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 MDP1Q86V88 176 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 JAZF1Q86VZ6 243 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 KBTBD8Q8NFY9 601 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 OR1J2Q8NGS2 313 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 LILRB1Q8NHL6 650 aaPredicted RBP7.73□□□□□ -1.17
COL8A1-207ENST00000483969 TMEM171Q8WVE6 324 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 DVL3Q92997 716 aaPredicted RBP7.73□□□□□ -1.17
COL8A1-207ENST00000483969 SLCO4A1Q96BD0 722 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 NRBF2Q96F24 287 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 RAB3IPQ96QF0 476 aaPredicted RBP7.73□□□□□ -1.17
COL8A1-207ENST00000483969 SNX18Q96RF0 628 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 FEVQ99581 238 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 CCL19Q99731 98 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 FOXC2Q99958 501 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 SH3GL3Q99963 347 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 DHRS9Q9BPW9 319 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 TSSK6Q9BXA6 273 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 C1orf198Q9H425 327 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 CXorf56Q9H5V9 222 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 CCNB1IP1Q9NPC3 277 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 VNN3Q9NY84 501 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 VSX1Q9NZR4 365 aaPredicted RBP7.73□□□□□ -1.17
COL8A1-207ENST00000483969 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.73□□□□□ -1.17
COL8A1-207ENST00000483969 MOKQ9UQ07 419 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 CDH10Q9Y6N8 788 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 ICE1Q9Y2F5 2266 aa7.73□□□□□ -1.17
COL8A1-207ENST00000483969 FLNBO75369 2602 aaKnown RBP7.73□□□□□ -1.17
COL8A1-207ENST00000483969 IQCMA0A1B0GVH7 501 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 A0A1W2PPL8 197 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 C12orf71A8MTZ7 269 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 SHISA9B4DS77 424 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 C22orf46C9J442 243 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 SLC16A7O60669 478 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 SMPD2O60906 423 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 TIPRLO75663 272 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 SERPINA5P05154 406 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 CST2P09228 141 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 CECR9P0C854 216 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 VAMP1P23763 118 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 LAP3P28838 519 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 APOBEC3AP31941 199 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms