RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 NCDNQ9UBB6 729 aa7.1□□□□□ -1.27
COL4A5-205ENST00000483338 POLR3KQ9Y2Y1 108 aaPredicted RBP7.1□□□□□ -1.27
COL4A5-205ENST00000483338 KCNE1BA0A087WTH5 132 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 AHRRA9YTQ3 701 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 GAPDHSO14556 408 aaPredicted RBP7.09□□□□□ -1.27
COL4A5-205ENST00000483338 DOK2O60496 412 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 GPANK1O95872 356 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 ARAFP10398 606 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 NT5EP21589 574 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 CHRNB4P30926 498 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 SULT1A2P50226 295 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 CCR5P51681 352 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 NR0B2Q15466 257 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 GRHL2Q6ISB3 625 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 OR4K1Q8NGD4 311 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 RNF2Q99496 336 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 CDC6Q99741 560 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 RNF126Q9BV68 326 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 FZD8Q9H461 694 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 SEMA4GQ9NTN9 838 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 HAO2Q9NYQ3 351 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 PLXNA4Q9HCM2 1894 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 MEIS3P1A6NDR6 274 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 B3GAT3O94766 335 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 CNOT4O95628 575 aaKnown RBP7.09□□□□□ -1.27
COL4A5-205ENST00000483338 CD3DP04234 171 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 OR13C7P0DN81 318 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 GTF2F2P13984 249 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 ARTNQ5T4W7 220 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 AADACL3Q5VUY0 350 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 P4HA3Q7Z4N8 544 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 MORN4Q8NDC4 146 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 ARRDC2Q8TBH0 407 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 MITD1Q8WV92 249 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 SMARCD2Q92925 531 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 WFIKKN1Q96NZ8 548 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 GNRHR2Q96P88 292 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 TP53RKQ96S44 253 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 SLC17A9Q9BYT1 436 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 EIF5A2Q9GZV4 153 aaKnown RBP7.09□□□□□ -1.27
COL4A5-205ENST00000483338 PARP12Q9H0J9 701 aaKnown RBP7.09□□□□□ -1.27
COL4A5-205ENST00000483338 RNF208Q9H0X6 261 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 CSNK1G1Q9HCP0 422 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 Q9N2J8 555 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 IL17CQ9P0M4 197 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 DKKL1Q9UK85 242 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 ANGPT4Q9Y264 503 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 TICRRQ7Z2Z1 1910 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 TRBV6-7A0A0A0MS04 114 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 A0A1W2PQ45 241 aaPredicted RBP7.09□□□□□ -1.27
COL4A5-205ENST00000483338 A0A1W2PQY0 241 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 IFITM5A6NNB3 132 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 H0YIV9 168 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 AQP7O14520 342 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 CTSLP07711 333 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 OR5AC1P0C628 307 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 PSMB6P28072 239 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 PCSK1P29120 753 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 TAF6P49848 677 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 UCP3P55916 312 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 GUCA2AQ02747 115 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 ZXDCQ2QGD7 858 aaPredicted RBP7.09□□□□□ -1.27
COL4A5-205ENST00000483338 ZNF385BQ569K4 471 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 YOD1Q5VVQ6 348 aaPredicted RBP7.09□□□□□ -1.27
COL4A5-205ENST00000483338 DMKNQ6E0U4 476 aaPredicted RBP7.09□□□□□ -1.27
COL4A5-205ENST00000483338 ZNF100Q8IYN0 542 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 ACOT4Q8N9L9 421 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 OR8S1Q8NH09 359 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 HAVCR1Q96D42 359 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 STACQ99469 402 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 BOCQ9BWV1 1114 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 OR8D2Q9GZM6 311 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 PLSCR2Q9NRY7 297 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 CUTCQ9NTM9 273 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 SLC2A8Q9NY64 477 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 USP36Q9P275 1121 aaKnown RBP7.09□□□□□ -1.27
COL4A5-205ENST00000483338 B3GAT1Q9P2W7 334 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 OR5V1Q9UGF6 321 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 GJD2Q9UKL4 321 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 OARD1Q9Y530 152 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 DOCK3Q8IZD9 2030 aa7.09□□□□□ -1.27
COL4A5-205ENST00000483338 DNAJC25-GNG10A0A024R161 153 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 DAPL1A0PJW8 107 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 EEF1E1-BLOC1S5C9J1V9 151 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 GPR39O43194 453 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 LCATP04180 440 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 LIPCP11150 499 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 NTSP30990 170 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 TAS2R38P59533 333 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 TMEM108Q6UXF1 575 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 OVCH1Q7RTY7 1134 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 C17orf64Q86WR6 236 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 GABRG1Q8N1C3 465 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 SMPDL3AQ92484 453 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 CORO2AQ92828 525 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 ZBTB8AQ96BR9 441 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 PGAM5Q96HS1 289 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 C4orf36Q96KX1 117 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 MYADMQ96S97 322 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 NDC1Q9BTX1 674 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms