RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 RIPPLY1Q0D2K3 151 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 FHL1Q13642 323 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 PCOLCEQ15113 449 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 SF3A2Q15428 464 aaKnown RBP6.92□□□□□ -1.3
SNX13-208ENST00000482558 NSDHLQ15738 373 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 ZNF79Q15937 498 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 YIF1BQ5BJH7 314 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 ALG10Q5BKT4 473 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 TMEM71Q6P5X7 295 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 ZNF517Q6ZMY9 492 aaPredicted RBP6.92□□□□□ -1.3
SNX13-208ENST00000482558 TMEM91Q6ZNR0 172 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 SHFQ7M4L6 423 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 SLC16A9Q7RTY1 509 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 FAM220AQ7Z4H9 259 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 SLC35F2Q8IXU6 374 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 SLC35F3Q8IY50 421 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 TIGD4Q8IY51 512 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 Q8N402 240 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 TMEM99Q8N816 258 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 SCAIQ8N9R8 606 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 NPEPL1Q8NDH3 523 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 OR2T4Q8NH00 348 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 ZNF563Q8TA94 476 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 ENKURQ8TC29 256 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 ZNF721Q8TF20 911 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 TMEM234Q8WY98 164 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 ITFG2Q969R8 447 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 ADIPOR1Q96A54 375 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 TMEM186Q96B77 213 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 C4orf36Q96KX1 117 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 DDOQ99489 341 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 NPAS1Q99742 590 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 VKORC1Q9BQB6 163 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 C7orf50Q9BRJ6 194 aaKnown RBP6.92□□□□□ -1.3
SNX13-208ENST00000482558 TBL1XR1Q9BZK7 514 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 OR8D2Q9GZM6 311 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 MIXL1Q9H2W2 232 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 PPP1R3EQ9H7J1 279 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 MMP25Q9NPA2 562 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 NGBQ9NPG2 151 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 CYSLTR2Q9NS75 346 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 COMMD3Q9UBI1 195 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 DTX4Q9Y2E6 619 aa6.92□□□□□ -1.3
SNX13-208ENST00000482558 LAMA2P24043 3122 aaKnown RBP6.92□□□□□ -1.3
SNX13-208ENST00000482558 TNRC18O15417 2968 aaPredicted RBP6.91□□□□□ -1.3
SNX13-208ENST00000482558 IGLV3-12A0A075B6K2 115 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 OR6C70A6NIJ9 312 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 FAM90A8PA6NJQ4 464 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 CENPXA8MT69 81 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 FAM25AB3EWG3 89 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 FAM25CB3EWG5 89 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 FAM25GB3EWG6 89 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 FLRT2O43155 660 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 TSPAN2O60636 221 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 REM1O75628 298 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 SLC25A12O75746 678 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 LALBAP00709 142 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 RAF1P04049 648 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 CSF3P09919 207 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 FAM90A13PP0C7W8 464 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 FAM90A24PP0C7X0 464 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 SPI1P17947 270 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 ADRA2CP18825 462 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 RAB3BP20337 219 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 NPR2P20594 1047 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 ACHEP22303 614 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 FKBP2P26885 142 aaKnown RBP6.91□□□□□ -1.3
SNX13-208ENST00000482558 HLA-DMAP28067 261 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 UQCRC1P31930 480 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 PYCR1P32322 319 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 CSNK1EP49674 416 aaKnown RBP6.91□□□□□ -1.3
SNX13-208ENST00000482558 P2RX1P51575 399 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 POLR2HP52434 150 aaKnown RBP6.91□□□□□ -1.3
SNX13-208ENST00000482558 OR1D5P58170 312 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 PMP22Q01453 160 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 ZNF85Q03923 595 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 PLCXD2Q0VAA5 305 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 IL18Q14116 193 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 CDK5R1Q15078 307 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 EBPQ15125 230 aaKnown RBP6.91□□□□□ -1.3
SNX13-208ENST00000482558 QPRTQ15274 297 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 SGCBQ16585 318 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 AARDQ4LEZ3 155 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 ACSM3Q53FZ2 586 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 HSD17B12Q53GQ0 312 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 PYHIN1Q6K0P9 492 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 RHBDD2Q6NTF9 364 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 CNIH2Q6PI25 160 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 ARL9Q6T311 187 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 PLET1Q6UQ28 207 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 NANOGNBQ7Z5D8 188 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 CEACAM19Q7Z692 300 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 SNX29P2Q8IUI4 249 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 UBQLNLQ8IYU4 475 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 RDH10Q8IZV5 341 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 DUSP18Q8NEJ0 188 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 OR5L2Q8NGL0 311 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 OR4K13Q8NH42 304 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 OR8K3Q8NH51 312 aa6.91□□□□□ -1.3
SNX13-208ENST00000482558 OR1L3Q8NH93 324 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms