RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 RDH11Q8TC12 318 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 FRAT1Q92837 279 aaPredicted RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 ABTB1Q969K4 478 aaPredicted RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 NTNG2Q96CW9 530 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 RAB3CQ96E17 227 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 TCEAL4Q96EI5 215 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 FAHD2AQ96GK7 314 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 TXNDC15Q96J42 360 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 TMEM56Q96MV1 263 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 ZNF641Q96N77 438 aaPredicted RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 OR2V2Q96R30 315 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 GPR22Q99680 433 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 TRIM51Q9BSJ1 452 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 APOOQ9BUR5 198 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 MRPS26Q9BYN8 205 aaKnown RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 COMMD4Q9H0A8 199 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 TLNRD1Q9H1K6 362 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 UGT1A7Q9HAW7 530 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 RDH14Q9HBH5 336 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 DUX4Q9UBX2 424 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 VPREB3Q9UKI3 123 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 UBQLN1Q9UMX0 589 aaKnown RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 FARSAQ9Y285 508 aaKnown RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 ARL2BPQ9Y2Y0 163 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 ASB4Q9Y574 426 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 ARL5AQ9Y689 179 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 TMEM56-RWDD3S4R434 201 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 TRIP12Q14669 1992 aaPredicted RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 CEP152O94986 1710 aa3.52□□□□□ -1.85
VPS41-212ENST00000482217 BAZ1BQ9UIG0 1483 aaKnown RBP3.52□□□□□ -1.85
VPS41-212ENST00000482217 CCNB3Q8WWL7 1395 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 ABCC11Q96J66 1382 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 KIF1BO60333 1816 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 KDM5BQ9UGL1 1544 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 MYH3P11055 1940 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 SMIM28A0A1B0GU29 152 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 IGLON5A6NGN9 336 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 SMIM9A6NGZ8 99 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 F5H6K3 240 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 F8W036 122 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 H7C0C1 242 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 KCNK1O00180 336 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 SLC1A7O00341 560 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 DVL1O14640 695 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 UGT1A9O60656 530 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 MPDU1O75352 247 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 CYB5R3P00387 301 aaPredicted RBP3.51□□□□□ -1.85
VPS41-212ENST00000482217 IGHG4P01861 327 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 IFNA16P05015 189 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 C2P06681 752 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 LIPCP11150 499 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 CSNK2A2P19784 350 aaPredicted RBP3.51□□□□□ -1.85
VPS41-212ENST00000482217 GZMHP20718 246 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 FASP25445 335 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 GRPRP30550 384 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 FGF9P31371 208 aaPredicted RBP3.51□□□□□ -1.85
VPS41-212ENST00000482217 RFC3P40938 356 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 OPRD1P41143 372 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 XCR1P46094 333 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 RPL5P46777 297 aaKnown RBP3.51□□□□□ -1.85
VPS41-212ENST00000482217 GSSP48637 474 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 AQP5P55064 265 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 RPS14P62263 151 aaKnown RBP3.51□□□□□ -1.85
VPS41-212ENST00000482217 SLC35B1P78383 322 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 CX3CL1P78423 397 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 NTHL1P78549 312 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 ELAVL2Q12926 359 aaKnown RBP3.51□□□□□ -1.85
VPS41-212ENST00000482217 APOFQ13790 326 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 GGTLC2Q14390 218 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 UBE2V2Q15819 145 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 POU2AF1Q16633 256 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 UPP1Q16831 310 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 CARD16Q5EG05 197 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 ZNF549Q6P9A3 640 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 CD200R1LQ6Q8B3 271 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 CYHR1Q6ZMK1 362 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 Q6ZRG5 221 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 GDPD3Q7L5L3 318 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 ZNF554Q86TJ5 538 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 THOC6Q86W42 341 aaKnown RBP3.51□□□□□ -1.85
VPS41-212ENST00000482217 HORMAD1Q86X24 394 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 LGI3Q8N145 548 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 DNAJC22Q8N4W6 341 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 ZNF561Q8N587 486 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 IQCF1Q8N6M8 205 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 NEXN-AS1Q8NBZ9 246 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 OR5L1Q8NGL2 311 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 OR10K1Q8NGX5 313 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 OR51A7Q8NH64 312 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 FNDC8Q8TC99 324 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 CCDC107Q8WV48 283 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 MRPL24Q96A35 216 aaKnown RBP3.51□□□□□ -1.85
VPS41-212ENST00000482217 ZBED6CLQ96FA7 236 aaPredicted RBP3.51□□□□□ -1.85
VPS41-212ENST00000482217 DYNLL2Q96FJ2 89 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 ANKRD36BP1Q96IX9 119 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 NOL4LQ96MY1 436 aaPredicted RBP3.51□□□□□ -1.85
VPS41-212ENST00000482217 CPXM1Q96SM3 734 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 KXD1Q9BQD3 176 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 YTHDF1Q9BYJ9 559 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms