RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 PAQR4Q8N4S7 273 aaPredicted RBP6.05□□□□□ -1.44
COL17A1-205ENST00000480127 ATG16L2Q8NAA4 619 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 OR4D11Q8NGI4 311 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 FGFBP3Q8TAT2 258 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 STON2Q8WXE9 905 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 PRRC1Q96M27 445 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF570Q96NI8 536 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 TSPAN32Q96QS1 320 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 DCLRE1CQ96SD1 692 aaKnown RBP6.05□□□□□ -1.44
COL17A1-205ENST00000480127 ALG12Q9BV10 488 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 FAM107BQ9H098 131 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 RACGAP1Q9H0H5 632 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 PCDHAC1Q9H158 963 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF665Q9H7R5 613 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 SMURF2Q9HAU4 748 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 MEPEQ9NQ76 525 aaPredicted RBP6.05□□□□□ -1.44
COL17A1-205ENST00000480127 C20orf141Q9NUB4 165 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 ARMCX1Q9P291 453 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 RPS6KA6Q9UK32 745 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 NDRG4Q9ULP0 352 aaKnown RBP6.05□□□□□ -1.44
COL17A1-205ENST00000480127 TMEM5Q9Y2B1 443 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 GMEB1Q9Y692 573 aa6.05□□□□□ -1.44
COL17A1-205ENST00000480127 HTR3EA5X5Y0 456 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 TRIM77I1YAP6 450 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 CXCR6O00574 342 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 FBP2O00757 339 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 WNT9BO14905 357 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 TMPRSS2O15393 492 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 NCR1O76036 304 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 SERPINA1P01009 418 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 AVPP01185 164 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 HLA-DQA2P01906 255 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 SBK2P0C263 348 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF250P15622 560 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 TNFRSF1AP19438 455 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 GPR4P46093 362 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 NUDT2P50583 147 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 SELENOWP63302 87 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 LCN2P80188 198 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 MXRA7P84157 204 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 LIPEQ05469 1076 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 FXNQ16595 210 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 ARMCX4Q5H9R4 360 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 FAM209AQ5JX71 171 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF774Q6NX45 483 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 LINC00114Q6XXX2 140 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF584Q8IVC4 421 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 SPICQ8N5J4 248 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 NPEPL1Q8NDH3 523 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 OR2Z1Q8NG97 314 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 OR13C2Q8NGS9 318 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 NANPQ8TBE9 248 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 SLC25A40Q8TBP6 338 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 IPCEF1Q8WWN9 437 aaPredicted RBP6.04□□□□□ -1.44
COL17A1-205ENST00000480127 YIPF5Q969M3 257 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 MCUR1Q96AQ8 359 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 HSH2DQ96JZ2 352 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 COG8Q96MW5 612 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 DIRC2Q96SL1 478 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 RBM4Q9BWF3 364 aaKnown RBP6.04□□□□□ -1.44
COL17A1-205ENST00000480127 CDADC1Q9BWV3 514 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 SUCNR1Q9BXA5 334 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 OR2H1Q9GZK4 316 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 OR2J1Q9GZK6 312 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 C7orf69Q9H7B7 122 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF696Q9H7X3 374 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 EFCAB1Q9HAE3 211 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 MSL2Q9HCI7 577 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 SAR1AQ9NR31 198 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 PLEK2Q9NYT0 353 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 ADA2Q9NZK5 511 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF224Q9NZL3 707 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 CGGBP1Q9UFW8 167 aaPredicted RBP6.04□□□□□ -1.44
COL17A1-205ENST00000480127 ZDHHC8Q9ULC8 765 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 V9GYQ6 96 aa6.04□□□□□ -1.44
COL17A1-205ENST00000480127 LOC105371242A0A075B767 164 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 LRRC30A6NM36 301 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 SOCS2O14508 198 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 SGCEO43556 437 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 SLC16A7O60669 478 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 THY1P04216 161 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 H1F0P07305 194 aaKnown RBP6.03□□□□□ -1.44
COL17A1-205ENST00000480127 CST2P09228 141 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 IRF2P14316 349 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 MAKP20794 623 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 CRYBB2P43320 205 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 LIMS1P48059 325 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 SLC7A2P52569 658 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 RAD23AP54725 363 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 PSG4Q00888 419 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 DEFA6Q01524 100 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 GUCY1A3Q02108 690 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 MSMPQ1L6U9 139 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 ANKDD1AQ495B1 522 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 MTX3Q5HYI7 312 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 C10orf128Q5T292 105 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 DNM1P34Q6PK57 102 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 VTCN1Q7Z7D3 282 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 WDFY1Q8IWB7 410 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 OR5L1Q8NGL2 311 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms