RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CDK6Q00534 326 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 STX3Q13277 289 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 C2orf68Q2NKX9 166 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 BEAN1Q3B7T3 259 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 Q6ZPA2 131 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 Q6ZR03 302 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 HDDC2Q7Z4H3 204 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 VANGL1Q8TAA9 524 aaPredicted RBP16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 ASB10Q8WXI3 467 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 PLEKHA8Q96JA3 519 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 FAM71F1Q96KD3 344 aaPredicted RBP16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 ROPN1BQ9BZX4 212 aaPredicted RBP16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 OR2H1Q9GZK4 316 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 WNT5BQ9H1J7 359 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 ROPN1Q9HAT0 212 aaPredicted RBP16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 SMURF2Q9HAU4 748 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 ELOVL3Q9HB03 270 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 TCF7L1Q9HCS4 588 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 MAN2C1Q9NTJ4 1040 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 IL19Q9UHD0 177 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 MCIDASD6RGH6 385 aa16.9■□□□□ 0.3
PDLIM1-202ENST00000477757 C3orf80F5H4A9 247 aa16.9■□□□□ 0.3
PDLIM1-202ENST00000477757 SURF4O15260 269 aa16.9■□□□□ 0.3
PDLIM1-202ENST00000477757 SLC2A10O95528 541 aa16.9■□□□□ 0.3
PDLIM1-202ENST00000477757 THRBP10828 461 aa16.9■□□□□ 0.3
PDLIM1-202ENST00000477757 POLR2JP52435 117 aaKnown RBP16.9■□□□□ 0.3
PDLIM1-202ENST00000477757 ARHGDIAP52565 204 aa16.9■□□□□ 0.3
PDLIM1-202ENST00000477757 ERVK-25P63136 954 aa16.9■□□□□ 0.3
PDLIM1-202ENST00000477757 TAF11Q15544 211 aa16.9■□□□□ 0.3
PDLIM1-202ENST00000477757 NANOGNBQ7Z5D8 188 aa16.9■□□□□ 0.3
PDLIM1-202ENST00000477757 C10orf111Q8N326 155 aa16.9■□□□□ 0.3
PDLIM1-202ENST00000477757 OR9I1Q8NGQ6 314 aa16.9■□□□□ 0.3
PDLIM1-202ENST00000477757 FAM110DQ8TAY7 271 aaPredicted RBP16.9■□□□□ 0.3
PDLIM1-202ENST00000477757 SSMEM1Q8WWF3 244 aa16.9■□□□□ 0.3
PDLIM1-202ENST00000477757 DYRK2Q92630 601 aa16.9■□□□□ 0.3
PDLIM1-202ENST00000477757 MCHR1Q99705 422 aa16.9■□□□□ 0.3
PDLIM1-202ENST00000477757 TRPC5OSA6NMA1 111 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 IFNL4K9M1U5 179 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 HDAC3O15379 428 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 TRMUO75648 421 aaKnown RBP16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 LYPD3O95274 346 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 HIST1H2ABP04908 130 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 ACADSP16219 412 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 GSTM3P21266 225 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 KITLGP21583 273 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 FGF12P61328 243 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 BST1Q10588 318 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 KPRPQ5T749 579 aaPredicted RBP16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 RUSC1-AS1Q66K80 236 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 SLC2A7Q6PXP3 512 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 HIST3H2AQ7L7L0 130 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 ARMC8Q8IUR7 673 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 FITM2Q8N6M3 262 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 GOLGA6L1Q8N7Z2 621 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 NPEPL1Q8NDH3 523 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 HIST1H2ACQ93077 130 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 NMD3Q96D46 503 aaKnown RBP16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 NEIL1Q96FI4 390 aaPredicted RBP16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 C4orf45Q96LM5 186 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 OR2V2Q96R30 315 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 ZNF607Q96SK3 696 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 NUDT16L1Q9BRJ7 211 aaKnown RBP16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 GCM1Q9NP62 436 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 SLC25A37Q9NYZ2 338 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 MIOXQ9UGB7 285 aa16.89■□□□□ 0.29
PDLIM1-202ENST00000477757 A0A1W2PRG6 482 aa16.88■□□□□ 0.29
PDLIM1-202ENST00000477757 C5orf63A6NC05 138 aa16.88■□□□□ 0.29
PDLIM1-202ENST00000477757 M0R3H8 397 aa16.88■□□□□ 0.29
PDLIM1-202ENST00000477757 KPNA4O00629 521 aaPredicted RBP16.88■□□□□ 0.29
PDLIM1-202ENST00000477757 GPR137BO60478 399 aa16.88■□□□□ 0.29
PDLIM1-202ENST00000477757 UMPSP11172 480 aa16.88■□□□□ 0.29
PDLIM1-202ENST00000477757 DAP3P51398 398 aaKnown RBP16.88■□□□□ 0.29
PDLIM1-202ENST00000477757 UGT2B15P54855 530 aa16.88■□□□□ 0.29
PDLIM1-202ENST00000477757 SCARB2Q14108 478 aa16.88■□□□□ 0.29
PDLIM1-202ENST00000477757 SLC27A4Q6P1M0 643 aa16.88■□□□□ 0.29
PDLIM1-202ENST00000477757 TTC33Q6PID6 262 aaPredicted RBP16.88■□□□□ 0.29
PDLIM1-202ENST00000477757 MSRB3Q8IXL7 192 aa16.88■□□□□ 0.29
PDLIM1-202ENST00000477757 ALDH16A1Q8IZ83 802 aa16.88■□□□□ 0.29
PDLIM1-202ENST00000477757 ZNF426Q9BUY5 554 aa16.88■□□□□ 0.29
PDLIM1-202ENST00000477757 TMEM165Q9HC07 324 aa16.88■□□□□ 0.29
PDLIM1-202ENST00000477757 IGKV1D-43A0A0B4J1Z2 117 aa16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 G3V4G9 280 aa16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 TNFRSF13BO14836 293 aaPredicted RBP16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 SERPINB7O75635 380 aa16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 THY1P04216 161 aa16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 F13BP05160 661 aa16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 AQP1P29972 269 aa16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 FMODQ06828 376 aa16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 RPL18Q07020 188 aaKnown RBP16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 NPTX1Q15818 432 aa16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 SGCAQ16586 387 aa16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 FAM27BQ5VT28 67 aa16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 NXNQ6DKJ4 435 aa16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 ARL9Q6T311 187 aa16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 OR8B3Q8NGG8 313 aa16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 MAELQ96JY0 434 aaKnown RBP16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 OR8B2Q96RD0 313 aa16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 POFUT1Q9H488 388 aa16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 TMEM38AQ9H6F2 299 aa16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 SSU72Q9NP77 194 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms