RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 GUSBP11Q6P575 273 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 RHOUQ7L0Q8 258 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.98□□□□□ -0.81
COL27A1-204ENST00000477421 ZNF679Q8IYX0 411 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 OR10K1Q8NGX5 313 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 OR51E1Q8TCB6 317 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 C7orf50Q9BRJ6 194 aaKnown RBP9.98□□□□□ -0.81
COL27A1-204ENST00000477421 NAA11Q9BSU3 229 aaPredicted RBP9.98□□□□□ -0.81
COL27A1-204ENST00000477421 MRI1Q9BV20 369 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 LAT2Q9GZY6 243 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 HRASLSQ9HDD0 168 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 PLEKHJ1Q9NW61 149 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 PCOLCE2Q9UKZ9 415 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 B9D1Q9UPM9 204 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 EXOGQ9Y2C4 368 aaKnown RBP9.98□□□□□ -0.81
COL27A1-204ENST00000477421 NOTCH4Q99466 2003 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 BCKDHBP21953 392 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 BDKRB2P30411 391 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 TAS2R19P59542 299 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 SNRPNP63162 240 aaKnown RBP9.98□□□□□ -0.81
COL27A1-204ENST00000477421 UBE2IP63279 158 aaKnown RBP9.98□□□□□ -0.81
COL27A1-204ENST00000477421 PIGTQ969N2 578 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 MENTQ9BUN1 341 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 KCNN3Q9UGI6 736 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 AGPAT2O15120 278 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 TNFSF14O43557 240 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 FOXF1Q12946 379 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 OPCMLQ14982 345 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 SMRP1Q8NCR6 262 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 NUDCD2Q8WVJ2 157 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 ST6GAL2Q96JF0 529 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 ARL5BQ96KC2 179 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 NIPAL2Q9H841 368 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 EVA1AQ9H8M9 152 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 SLC5A6Q9Y289 635 aa9.98□□□□□ -0.81
COL27A1-204ENST00000477421 MT-ATP6P00846 226 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 PI3P19957 117 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 POU3F3P20264 500 aaPredicted RBP9.97□□□□□ -0.81
COL27A1-204ENST00000477421 GDF1P27539 372 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 ZNF93P35789 620 aaPredicted RBP9.97□□□□□ -0.81
COL27A1-204ENST00000477421 RFC3P40938 356 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 TSPAN7P41732 249 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 ACAA2P42765 397 aaKnown RBP9.97□□□□□ -0.81
COL27A1-204ENST00000477421 SLC19A3Q9BZV2 496 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 LAMA2P24043 3122 aaKnown RBP9.97□□□□□ -0.81
COL27A1-204ENST00000477421 TCF20Q9UGU0 1960 aaKnown RBP9.97□□□□□ -0.81
COL27A1-204ENST00000477421 CACNA1DQ01668 2161 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 LOC100289279A0A1B0GTE1 492 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 LILRA5A6NI73 299 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 THY1P04216 161 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 CTLA4P16410 223 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 PTGS2P35354 604 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 HERV-K104P61576 105 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 PMPCAQ10713 525 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 OPN5Q6U736 354 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 P4HA3Q7Z4N8 544 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 YRDCQ86U90 279 aaKnown RBP9.97□□□□□ -0.81
COL27A1-204ENST00000477421 PDZD9Q8IXQ8 264 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 DHRS1Q96LJ7 313 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 SORCS2Q96PQ0 1159 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 CHRDQ9H2X0 955 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 SLC22A11Q9NSA0 550 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 MEMO1Q9Y316 297 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 B3GALT1Q9Y5Z6 326 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 MKI67P46013 3256 aaKnown RBP9.97□□□□□ -0.81
COL27A1-204ENST00000477421 ARPC3O15145 178 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 DBHP09172 617 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 TCN2P20062 427 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 NFYAP23511 347 aaPredicted RBP9.97□□□□□ -0.81
COL27A1-204ENST00000477421 GPR3P46089 330 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 PRSS12P56730 875 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 SLC26A5P58743 744 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 SLC17A1Q14916 467 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 LINC00303Q3SY05 128 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 WDR38Q5JTN6 314 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 ABHD17BQ5VST6 288 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 NPEPL1Q8NDH3 523 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 STEAP2Q8NFT2 490 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 PHB2Q99623 299 aa9.97□□□□□ -0.81
COL27A1-204ENST00000477421 ZNF436Q9C0F3 470 aaPredicted RBP9.97□□□□□ -0.81
COL27A1-204ENST00000477421 TMEM221A6NGB7 291 aa9.96□□□□□ -0.81
COL27A1-204ENST00000477421 FRG2CA6NGY1 282 aa9.96□□□□□ -0.81
COL27A1-204ENST00000477421 IGHA1P01876 353 aa9.96□□□□□ -0.81
COL27A1-204ENST00000477421 GLP1RP43220 463 aa9.96□□□□□ -0.81
COL27A1-204ENST00000477421 GABREP78334 506 aa9.96□□□□□ -0.81
COL27A1-204ENST00000477421 ARSKQ6UWY0 536 aa9.96□□□□□ -0.81
COL27A1-204ENST00000477421 OR51A4Q8NGJ6 313 aa9.96□□□□□ -0.81
COL27A1-204ENST00000477421 OR1N1Q8NGS0 311 aa9.96□□□□□ -0.81
COL27A1-204ENST00000477421 OR1J4Q8NGS1 313 aa9.96□□□□□ -0.81
COL27A1-204ENST00000477421 HAVCR2Q8TDQ0 301 aa9.96□□□□□ -0.81
COL27A1-204ENST00000477421 MAFIPQ8WZ33 124 aa9.96□□□□□ -0.81
COL27A1-204ENST00000477421 CPNE2Q96FN4 548 aaPredicted RBP9.96□□□□□ -0.81
COL27A1-204ENST00000477421 SCGB3A2Q96PL1 93 aa9.96□□□□□ -0.81
COL27A1-204ENST00000477421 TMEM59Q9BXS4 323 aa9.96□□□□□ -0.81
COL27A1-204ENST00000477421 TGIF2Q9GZN2 237 aa9.96□□□□□ -0.81
COL27A1-204ENST00000477421 SLC7A11Q9UPY5 501 aa9.96□□□□□ -0.81
COL27A1-204ENST00000477421 ACACAQ13085 2346 aa9.96□□□□□ -0.81
COL27A1-204ENST00000477421 ZNF705EA8MWA4 302 aaPredicted RBP9.96□□□□□ -0.82
COL27A1-204ENST00000477421 DCTN6O00399 190 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 PMP2P02689 132 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms