RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 LHFPL6Q9Y693 200 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 PLCE1Q9P212 2302 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 CCDC182A6NF36 153 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 FARS2O95363 451 aaKnown RBP13.79□□□□□ -0.2
COPS3-207ENST00000477299 IGKV3-15P01624 115 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 IGLV1-44P01699 117 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 HLA-DQA2P01906 255 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 CST2P09228 141 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 ZNF14P17017 642 aaPredicted RBP13.79□□□□□ -0.2
COPS3-207ENST00000477299 CD40P25942 277 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 CALCRP30988 508 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 GGT2P36268 569 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 HSF2Q03933 536 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 RIPK1Q13546 671 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 KLHL12Q53G59 568 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 BEX5Q5H9J7 111 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 PABPC1L2AQ5JQF8 200 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 ZNF774Q6NX45 483 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 DNM1P34Q6PK57 102 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 PAQR4Q8N4S7 273 aaPredicted RBP13.79□□□□□ -0.2
COPS3-207ENST00000477299 OR6K6Q8NGW6 343 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 SLC38A2Q96QD8 506 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 OBP2BQ9NPH6 170 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 RASSF1Q9NS23 344 aa13.79□□□□□ -0.2
COPS3-207ENST00000477299 SMPD3Q9NY59 655 aaPredicted RBP13.79□□□□□ -0.2
COPS3-207ENST00000477299 NDRG4Q9ULP0 352 aaKnown RBP13.79□□□□□ -0.2
COPS3-207ENST00000477299 DSCAMO60469 2012 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 LOC100130705A0A1B0GUX0 176 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 ABCD4O14678 606 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 RER1O15258 196 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 UBL3O95164 117 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 APEX1P27695 318 aaKnown RBP13.78□□□□□ -0.2
COPS3-207ENST00000477299 HCCSP53701 268 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 APOFQ13790 326 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 NRN1LQ496H8 165 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 AADACL4Q5VUY2 407 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 ADAM5Q6NVV9 412 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 KBTBD8Q8NFY9 601 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 FAM81AQ8TBF8 368 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 TMEM163Q8TC26 289 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 SLC7A6Q92536 515 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 OR2H1Q9GZK4 316 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 LIME1Q9H400 295 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 DNAJC27Q9NZQ0 273 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 ASH2LQ9UBL3 628 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 ENOPH1Q9UHY7 261 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 MOKQ9UQ07 419 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 GMPPBQ9Y5P6 360 aa13.78□□□□□ -0.2
COPS3-207ENST00000477299 LRBAP50851 2863 aa13.77□□□□□ -0.2
COPS3-207ENST00000477299 LOC100509620A0A075B734 347 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 SHISA9B4DS77 424 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 ATP6V1G2-DDX39BF2Z307 99 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 SELENOFO60613 162 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 GLCEO94923 617 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 FMO3P31513 532 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 ARR3P36575 388 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 GUCA1AP43080 201 aaPredicted RBP13.77□□□□□ -0.21
COPS3-207ENST00000477299 LSM6P62312 80 aaKnown RBP13.77□□□□□ -0.21
COPS3-207ENST00000477299 ADARB1P78563 741 aaKnown RBP13.77□□□□□ -0.21
COPS3-207ENST00000477299 NAAAQ02083 359 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 GLO1Q04760 184 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 SLC36A2Q495M3 483 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 CCDC92Q53HC0 331 aaPredicted RBP13.77□□□□□ -0.21
COPS3-207ENST00000477299 FBXW10Q5XX13 1052 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 TMEM53Q6P2H8 277 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 TMEM154Q6P9G4 183 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 CCDC36Q8IYA8 594 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 PIAS4Q8N2W9 510 aaPredicted RBP13.77□□□□□ -0.21
COPS3-207ENST00000477299 PACRGLQ8N7B6 248 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 TEAD3Q99594 435 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 PITX2Q99697 317 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 CCNB1IP1Q9NPC3 277 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 COMMD3-BMI1R4GMX3 469 aa13.77□□□□□ -0.21
COPS3-207ENST00000477299 ZNF593O00488 134 aaPredicted RBP13.76□□□□□ -0.21
COPS3-207ENST00000477299 SLC16A6O15403 523 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 RAB36O95755 333 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 GABRB1P18505 474 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 PAICSP22234 425 aaKnown RBP13.76□□□□□ -0.21
COPS3-207ENST00000477299 GSTT1P30711 240 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 AQP4P55087 323 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 RPS7P62081 194 aaKnown RBP13.76□□□□□ -0.21
COPS3-207ENST00000477299 HIST1H3AP68431 136 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 HGFACQ04756 655 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 HIST2H3PS2Q5TEC6 136 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 SLC18B1Q6NT16 456 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 CFAP77Q6ZQR2 320 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 HIST2H3AQ71DI3 136 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 TMEM200AQ86VY9 491 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 CDC20BQ86Y33 519 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 TIGD4Q8IY51 512 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 ENTHD1Q8IYW4 607 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 OR10S1Q8NGN2 331 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 CYGBQ8WWM9 190 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 NANOS1Q8WY41 292 aaKnown RBP13.76□□□□□ -0.21
COPS3-207ENST00000477299 C14orf79Q96F83 325 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 MAP6Q96JE9 813 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 RADILQ96JH8 1075 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 AMELYQ99218 206 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 TMEM204Q9BSN7 226 aa13.76□□□□□ -0.21
COPS3-207ENST00000477299 TEX12Q9BXU0 123 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms