RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 CDCA4Q9BXL8 241 aa13.71□□□□□ -0.21
CPSF3-203ENST00000475482 OR51V1Q9H2C8 321 aa13.71□□□□□ -0.21
CPSF3-203ENST00000475482 HAO2Q9NYQ3 351 aa13.71□□□□□ -0.21
CPSF3-203ENST00000475482 ARHGEF9O43307 516 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 AKAP8O43823 692 aaKnown RBP13.7□□□□□ -0.22
CPSF3-203ENST00000475482 TMCC2O75069 709 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 SERPINI2O75830 405 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 NKX6-1P78426 367 aaPredicted RBP13.7□□□□□ -0.22
CPSF3-203ENST00000475482 POU3F1Q03052 451 aaPredicted RBP13.7□□□□□ -0.22
CPSF3-203ENST00000475482 SLC17A1Q14916 467 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 TBCEQ15813 527 aaPredicted RBP13.7□□□□□ -0.22
CPSF3-203ENST00000475482 DNM1P34Q6PK57 102 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 SSX8Q7RTT4 187 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 BCDIN3DQ7Z5W3 292 aaKnown RBP13.7□□□□□ -0.22
CPSF3-203ENST00000475482 LSRQ86X29 649 aaPredicted RBP13.7□□□□□ -0.22
CPSF3-203ENST00000475482 ZNF100Q8IYN0 542 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 ZNF433Q8N7K0 673 aaPredicted RBP13.7□□□□□ -0.22
CPSF3-203ENST00000475482 ZNF611Q8N823 705 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 CYB561A3Q8NBI2 242 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 LILRB1Q8NHL6 650 aaPredicted RBP13.7□□□□□ -0.22
CPSF3-203ENST00000475482 ZNF519Q8TB69 540 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 RORBQ92753 470 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 PTP4A1Q93096 173 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 ADAD1Q96M93 576 aaKnown RBP13.7□□□□□ -0.22
CPSF3-203ENST00000475482 SIGLEC11Q96RL6 698 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 TEAD3Q99594 435 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 SF3B5Q9BWJ5 86 aaKnown RBP13.7□□□□□ -0.22
CPSF3-203ENST00000475482 FAM192AQ9GZU8 254 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 FGF20Q9NP95 211 aaPredicted RBP13.7□□□□□ -0.22
CPSF3-203ENST00000475482 SEC14L4Q9UDX3 406 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 MALT1Q9UDY8 824 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 DIMT1Q9UNQ2 313 aaKnown RBP13.7□□□□□ -0.22
CPSF3-203ENST00000475482 ERGIC3Q9Y282 383 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 NOSIPQ9Y314 301 aaKnown RBP13.7□□□□□ -0.22
CPSF3-203ENST00000475482 EXOSC1Q9Y3B2 195 aaKnown RBP13.7□□□□□ -0.22
CPSF3-203ENST00000475482 FLVCR1Q9Y5Y0 555 aa13.7□□□□□ -0.22
CPSF3-203ENST00000475482 NIPBLQ6KC79 2804 aaeCLIP13.7□□□□□ -0.22
CPSF3-203ENST00000475482 HEATR1Q9H583 2144 aaKnown RBP13.69□□□□□ -0.22
CPSF3-203ENST00000475482 SMIM31A0A1B0GVY4 71 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 PRSS37A4D1T9 235 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 HS3ST1O14792 307 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 SMPD2O60906 423 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 LYZL6O75951 148 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 MT-ND2P03891 347 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 HTR1AP08908 422 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 IFNGR1P15260 489 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 CRABP1P29762 137 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 CDKN2AP42771 156 aaKnown RBP13.69□□□□□ -0.22
CPSF3-203ENST00000475482 ALDH3B2P48448 385 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 ACTC1P68032 377 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 ACTA1P68133 377 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 EMX1Q04741 257 aaPredicted RBP13.69□□□□□ -0.22
CPSF3-203ENST00000475482 NEDD8Q15843 81 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 MESTQ5EB52 335 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 TIMM23BQ5SRD1 257 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.69□□□□□ -0.22
CPSF3-203ENST00000475482 GPR141Q7Z602 305 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 GPAT4Q86UL3 456 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 P2RY8Q86VZ1 359 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 POMGNT2Q8NAT1 580 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 BBS1Q8NFJ9 593 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 OR52I1Q8NGK6 324 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 ASB10Q8WXI3 467 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 APH1AQ96BI3 265 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 MRPL48Q96GC5 212 aaKnown RBP13.69□□□□□ -0.22
CPSF3-203ENST00000475482 CCL19Q99731 98 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 GSX2Q9BZM3 304 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 NMNAT2Q9BZQ4 307 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 RACGAP1Q9H0H5 632 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 NGBQ9NPG2 151 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 INPP5EQ9NRR6 644 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 EXOGQ9Y2C4 368 aaKnown RBP13.69□□□□□ -0.22
CPSF3-203ENST00000475482 ALPK2Q86TB3 2170 aa13.69□□□□□ -0.22
CPSF3-203ENST00000475482 NAV3Q8IVL0 2385 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 OR6C68A6NDL8 312 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 DPRXA6NFQ7 191 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 ZNF726A6NNF4 738 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 CENPBD1B2RD01 187 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 GLCEO94923 617 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 SPI1P17947 270 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 SLC2A5P22732 501 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 P2RY4P51582 365 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 PIGFQ07326 219 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 ZIC4Q8N9L1 334 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 TMEM45BQ96B21 275 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 LGALS12Q96DT0 336 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 DDOQ99489 341 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 RHNO1Q9BSD3 238 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 ALG12Q9BV10 488 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 MND1Q9BWT6 205 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 MED20Q9H944 212 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 ACOT13Q9NPJ3 140 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 RPRD1BQ9NQG5 326 aaKnown RBP13.68□□□□□ -0.22
CPSF3-203ENST00000475482 ZNF701Q9NV72 531 aaPredicted RBP13.68□□□□□ -0.22
CPSF3-203ENST00000475482 VSX1Q9NZR4 365 aaPredicted RBP13.68□□□□□ -0.22
CPSF3-203ENST00000475482 FKBP7Q9Y680 259 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 COMMD3-BMI1R4GMX3 469 aa13.68□□□□□ -0.22
CPSF3-203ENST00000475482 TLN2Q9Y4G6 2542 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 CSPG4Q6UVK1 2322 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 A6NHS1 94 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms