RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 RPL27P61353 136 aaKnown RBP10.04□□□□□ -0.8
VAPB-204ENST00000475243 PPIAP62937 165 aaKnown RBP10.04□□□□□ -0.8
VAPB-204ENST00000475243 ELAVL1Q15717 326 aaKnown RBP10.04□□□□□ -0.8
VAPB-204ENST00000475243 H2BFWTQ7Z2G1 175 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 SLC43A2Q8N370 569 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 TMEM102Q8N9M5 508 aaPredicted RBP10.04□□□□□ -0.8
VAPB-204ENST00000475243 HSD17B11Q8NBQ5 300 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 ACOXLQ9NUZ1 547 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.04□□□□□ -0.8
VAPB-204ENST00000475243 M0R1B8 84 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 YKT6O15498 198 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 FOSL1P15407 271 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 TRHRP34981 398 aaPredicted RBP10.04□□□□□ -0.8
VAPB-204ENST00000475243 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.04□□□□□ -0.8
VAPB-204ENST00000475243 ADGRE4PQ86SQ3 457 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 OR51S1Q8NGJ8 323 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 OR10X1Q8NGY0 326 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 ADAM19Q9H013 955 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 LYRM4Q9HD34 91 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 MTCH1Q9NZJ7 389 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 PCSK6P29122 969 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 EMP3P54852 163 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 ZNF784Q8NCA9 323 aaPredicted RBP10.04□□□□□ -0.8
VAPB-204ENST00000475243 OR51A4Q8NGJ6 313 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 OR51A2Q8NGJ7 313 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 CSF3RQ99062 836 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 C11orf54Q9H0W9 315 aaPredicted RBP10.04□□□□□ -0.8
VAPB-204ENST00000475243 RIMS4Q9H426 269 aaPredicted RBP10.04□□□□□ -0.8
VAPB-204ENST00000475243 CHST11Q9NPF2 352 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 IDSB3KWA1 339 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 E9PI62 339 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 HOXD12P35452 270 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 TMEM240Q5SV17 173 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 MAML2Q8IZL2 1156 aaPredicted RBP10.03□□□□□ -0.8
VAPB-204ENST00000475243 UBTD2Q8WUN7 234 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 REEP6Q96HR9 211 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 SEC16AO15027 2179 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 ST6GAL1P15907 406 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 DEFB109BQ30KR1 87 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 THNSL2Q86YJ6 484 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 TDHQ8IZJ6 230 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 C11orf40Q8WZ69 217 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 SLC35B4Q969S0 331 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 ARRDC1-AS1Q9H2J1 176 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 MRPL22Q9NWU5 206 aaKnown RBP10.03□□□□□ -0.8
VAPB-204ENST00000475243 ZNF346Q9UL40 294 aaKnown RBP10.03□□□□□ -0.8
VAPB-204ENST00000475243 CHST2Q9Y4C5 530 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 OR2W5A6NFC9 320 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 HMGN4O00479 90 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 OLFM2O95897 454 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 FPR3P25089 353 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 IL3RAP26951 378 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 ARNTP27540 789 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 MRPL19P49406 292 aaKnown RBP10.03□□□□□ -0.8
VAPB-204ENST00000475243 FAM185AQ8N0U4 392 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 OR51E1Q8TCB6 317 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 DAPP1Q9UN19 280 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 DIMT1Q9UNQ2 313 aaKnown RBP10.03□□□□□ -0.8
VAPB-204ENST00000475243 DOCK5Q9H7D0 1870 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 FAM221AA4D161 298 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 GPR171O14626 319 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 TRAF3IP2O43734 574 aaPredicted RBP10.03□□□□□ -0.8
VAPB-204ENST00000475243 ETFBKMTQ8IXQ9 262 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 TMEM104Q8NE00 496 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 MRGPRX1Q96LB2 322 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 ASH2LQ9UBL3 628 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 ETV7Q9Y603 341 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 ICOSLGO75144 302 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 UBL3O95164 117 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 HEXAP06865 529 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 P2RX3P56373 397 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.03□□□□□ -0.8
VAPB-204ENST00000475243 NAA40Q86UY6 237 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 NANPQ8TBE9 248 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 MAST2Q6P0Q8 1798 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 PRRG2O14669 202 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 TNFSF15O95150 251 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 OR13C7P0DN81 318 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 APOBEC1P41238 236 aaKnown RBP10.03□□□□□ -0.8
VAPB-204ENST00000475243 ADIRFQ15847 76 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 CD300LGQ6UXG3 332 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 BAGE3Q86Y29 109 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 BAGE2Q86Y30 109 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 KIRREL1Q96J84 757 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 STACQ99469 402 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 ZDHHC5Q9C0B5 715 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 EGLN1Q9GZT9 426 aa10.03□□□□□ -0.8
VAPB-204ENST00000475243 MKRN2Q9H000 416 aaKnown RBP10.03□□□□□ -0.8
VAPB-204ENST00000475243 OTOFQ9HC10 1997 aa10.02□□□□□ -0.8
VAPB-204ENST00000475243 BHLHE40O14503 412 aa10.02□□□□□ -0.8
VAPB-204ENST00000475243 TAGLN2P37802 199 aaKnown RBP10.02□□□□□ -0.8
VAPB-204ENST00000475243 RAB5CP51148 216 aa10.02□□□□□ -0.8
VAPB-204ENST00000475243 KDM4DQ6B0I6 523 aa10.02□□□□□ -0.8
VAPB-204ENST00000475243 WFDC8Q8IUA0 241 aa10.02□□□□□ -0.8
VAPB-204ENST00000475243 OR51F2Q8NH61 342 aa10.02□□□□□ -0.8
VAPB-204ENST00000475243 SFT2D1Q8WV19 159 aa10.02□□□□□ -0.8
VAPB-204ENST00000475243 TSLPQ969D9 159 aa10.02□□□□□ -0.8
VAPB-204ENST00000475243 TEAD3Q99594 435 aa10.02□□□□□ -0.8
VAPB-204ENST00000475243 A0A1W2PPH5 198 aa10.02□□□□□ -0.8
VAPB-204ENST00000475243 RPS27P42677 84 aaKnown RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms