RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 OR4C15Q8NGM1 316 aa20.65■□□□□ 0.9
CPNE1-223ENST00000475146 NEU4Q8WWR8 484 aaPredicted RBP20.65■□□□□ 0.9
CPNE1-223ENST00000475146 POM121L2Q96KW2 1035 aa20.65■□□□□ 0.9
CPNE1-223ENST00000475146 BCL2L14Q9BZR8 327 aa20.65■□□□□ 0.9
CPNE1-223ENST00000475146 REEP1Q9H902 201 aa20.65■□□□□ 0.9
CPNE1-223ENST00000475146 MYOZ1Q9NP98 299 aaPredicted RBP20.65■□□□□ 0.9
CPNE1-223ENST00000475146 EIF3KQ9UBQ5 218 aaKnown RBP20.65■□□□□ 0.9
CPNE1-223ENST00000475146 REV1Q9UBZ9 1251 aa20.65■□□□□ 0.9
CPNE1-223ENST00000475146 COA3Q9Y2R0 106 aaPredicted RBP20.65■□□□□ 0.9
CPNE1-223ENST00000475146 SAMHD1Q9Y3Z3 626 aaKnown RBP20.65■□□□□ 0.9
CPNE1-223ENST00000475146 CR1P17927 2039 aa20.65■□□□□ 0.9
CPNE1-223ENST00000475146 TP53P04637 393 aaPredicted RBP20.64■□□□□ 0.89
CPNE1-223ENST00000475146 PCSK6P29122 969 aa20.64■□□□□ 0.89
CPNE1-223ENST00000475146 ALDH3B1P43353 468 aa20.64■□□□□ 0.89
CPNE1-223ENST00000475146 CENPAP49450 140 aa20.64■□□□□ 0.89
CPNE1-223ENST00000475146 UCP2P55851 309 aa20.64■□□□□ 0.89
CPNE1-223ENST00000475146 SELENOVP59797 346 aa20.64■□□□□ 0.89
CPNE1-223ENST00000475146 PPP1R8Q12972 351 aaKnown RBP20.64■□□□□ 0.89
CPNE1-223ENST00000475146 MAD2L1BPQ15013 274 aaPredicted RBP20.64■□□□□ 0.89
CPNE1-223ENST00000475146 OR2T5Q6IEZ7 315 aa20.64■□□□□ 0.89
CPNE1-223ENST00000475146 LEG1Q6P5S2 330 aa20.64■□□□□ 0.89
CPNE1-223ENST00000475146 DNM1P34Q6PK57 102 aa20.64■□□□□ 0.89
CPNE1-223ENST00000475146 GLB1L2Q8IW92 636 aa20.64■□□□□ 0.89
CPNE1-223ENST00000475146 OR2T29Q8NH02 315 aa20.64■□□□□ 0.89
CPNE1-223ENST00000475146 C11orf40Q8WZ69 217 aa20.64■□□□□ 0.89
CPNE1-223ENST00000475146 BTBD10Q9BSF8 475 aa20.64■□□□□ 0.89
CPNE1-223ENST00000475146 PIMREGQ9BSJ6 248 aa20.64■□□□□ 0.89
CPNE1-223ENST00000475146 NUAK2Q9H093 628 aa20.64■□□□□ 0.89
CPNE1-223ENST00000475146 MYEF2Q9P2K5 600 aaKnown RBP20.64■□□□□ 0.89
CPNE1-223ENST00000475146 U3KQV3 271 aa20.64■□□□□ 0.89
CPNE1-223ENST00000475146 CSPG4Q6UVK1 2322 aa20.64■□□□□ 0.89
CPNE1-223ENST00000475146 LOC100509620A0A075B734 347 aa20.63■□□□□ 0.89
CPNE1-223ENST00000475146 ACOT8O14734 319 aa20.63■□□□□ 0.89
CPNE1-223ENST00000475146 ARPC3O15145 178 aa20.63■□□□□ 0.89
CPNE1-223ENST00000475146 RENP00797 406 aa20.63■□□□□ 0.89
CPNE1-223ENST00000475146 IGFBP1P08833 259 aaPredicted RBP20.63■□□□□ 0.89
CPNE1-223ENST00000475146 SCRN3Q0VDG4 424 aa20.63■□□□□ 0.89
CPNE1-223ENST00000475146 TRAP1Q12931 704 aaKnown RBP20.63■□□□□ 0.89
CPNE1-223ENST00000475146 OTPQ5XKR4 325 aa20.63■□□□□ 0.89
CPNE1-223ENST00000475146 SYT9Q86SS6 491 aa20.63■□□□□ 0.89
CPNE1-223ENST00000475146 AQP11Q8NBQ7 271 aa20.63■□□□□ 0.89
CPNE1-223ENST00000475146 OR52L1Q8NGH7 329 aa20.63■□□□□ 0.89
CPNE1-223ENST00000475146 OR1J1Q8NGS3 322 aa20.63■□□□□ 0.89
CPNE1-223ENST00000475146 OR4K13Q8NH42 304 aa20.63■□□□□ 0.89
CPNE1-223ENST00000475146 NMNAT3Q96T66 252 aa20.63■□□□□ 0.89
CPNE1-223ENST00000475146 WACQ9BTA9 647 aa20.63■□□□□ 0.89
CPNE1-223ENST00000475146 EGLN3Q9H6Z9 239 aa20.63■□□□□ 0.89
CPNE1-223ENST00000475146 VNN3Q9NY84 501 aa20.63■□□□□ 0.89
CPNE1-223ENST00000475146 POLR1DQ9Y2S0 133 aa20.63■□□□□ 0.89
CPNE1-223ENST00000475146 CDH10Q9Y6N8 788 aa20.63■□□□□ 0.89
CPNE1-223ENST00000475146 A0A096LNT2 108 aa20.62■□□□□ 0.89
CPNE1-223ENST00000475146 RAP2AP10114 183 aa20.62■□□□□ 0.89
CPNE1-223ENST00000475146 DAOP14920 347 aa20.62■□□□□ 0.89
CPNE1-223ENST00000475146 HIST1H1CP16403 213 aaKnown RBP20.62■□□□□ 0.89
CPNE1-223ENST00000475146 CRABP1P29762 137 aa20.62■□□□□ 0.89
CPNE1-223ENST00000475146 KLF3P57682 345 aaPredicted RBP20.62■□□□□ 0.89
CPNE1-223ENST00000475146 KRTAP1-1Q07627 177 aa20.62■□□□□ 0.89
CPNE1-223ENST00000475146 NKPD1Q17RQ9 610 aa20.62■□□□□ 0.89
CPNE1-223ENST00000475146 ALKBH6Q3KRA9 238 aa20.62■□□□□ 0.89
CPNE1-223ENST00000475146 CLEC12AQ5QGZ9 265 aa20.62■□□□□ 0.89
CPNE1-223ENST00000475146 RPL13AP3Q6NVV1 102 aa20.62■□□□□ 0.89
CPNE1-223ENST00000475146 SYNPRQ8TBG9 265 aa20.62■□□□□ 0.89
CPNE1-223ENST00000475146 TSSK2Q96PF2 358 aa20.62■□□□□ 0.89
CPNE1-223ENST00000475146 MS4A5Q9H3V2 200 aa20.62■□□□□ 0.89
CPNE1-223ENST00000475146 LOC390937A0A1W2PQ73 354 aa20.61■□□□□ 0.89
CPNE1-223ENST00000475146 NDUFS8O00217 210 aa20.61■□□□□ 0.89
CPNE1-223ENST00000475146 DOK2O60496 412 aa20.61■□□□□ 0.89
CPNE1-223ENST00000475146 MPZL1O95297 269 aa20.61■□□□□ 0.89
CPNE1-223ENST00000475146 CLPTM1O96005 669 aa20.61■□□□□ 0.89
CPNE1-223ENST00000475146 GASTP01350 101 aa20.61■□□□□ 0.89
CPNE1-223ENST00000475146 HOXB4P17483 251 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-223ENST00000475146 WNT5AP41221 380 aa20.61■□□□□ 0.89
CPNE1-223ENST00000475146 PPP2R2BQ00005 443 aa20.61■□□□□ 0.89
CPNE1-223ENST00000475146 LOXL1Q08397 574 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-223ENST00000475146 AQP6Q13520 282 aa20.61■□□□□ 0.89
CPNE1-223ENST00000475146 ZNF770Q6IQ21 691 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-223ENST00000475146 UNQ6126/PRO20091Q6UXV3 157 aa20.61■□□□□ 0.89
CPNE1-223ENST00000475146 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-223ENST00000475146 ZNF101Q8IZC7 436 aa20.61■□□□□ 0.89
CPNE1-223ENST00000475146 ADGRG5Q8IZF4 528 aa20.61■□□□□ 0.89
CPNE1-223ENST00000475146 SLC7A6OSQ96CW6 309 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-223ENST00000475146 POM121Q96HA1 1249 aa20.61■□□□□ 0.89
CPNE1-223ENST00000475146 CHID1Q9BWS9 393 aa20.61■□□□□ 0.89
CPNE1-223ENST00000475146 TAAR3PQ9P1P4 343 aa20.61■□□□□ 0.89
CPNE1-223ENST00000475146 NDRG4Q9ULP0 352 aaKnown RBP20.61■□□□□ 0.89
CPNE1-223ENST00000475146 SETD2Q9BYW2 2564 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-223ENST00000475146 AQP12BA6NM10 295 aa20.6■□□□□ 0.89
CPNE1-223ENST00000475146 SGCEO43556 437 aa20.6■□□□□ 0.89
CPNE1-223ENST00000475146 IDH3BO43837 385 aa20.6■□□□□ 0.89
CPNE1-223ENST00000475146 NAT2P11245 290 aa20.6■□□□□ 0.89
CPNE1-223ENST00000475146 ZNF250P15622 560 aa20.6■□□□□ 0.89
CPNE1-223ENST00000475146 USF1P22415 310 aaPredicted RBP20.6■□□□□ 0.89
CPNE1-223ENST00000475146 HTR5AP47898 357 aa20.6■□□□□ 0.89
CPNE1-223ENST00000475146 GGTLC2Q14390 218 aa20.6■□□□□ 0.89
CPNE1-223ENST00000475146 SPATA46Q5T0L3 261 aa20.6■□□□□ 0.89
CPNE1-223ENST00000475146 SLC35F1Q5T1Q4 408 aa20.6■□□□□ 0.89
CPNE1-223ENST00000475146 AQP12AQ8IXF9 295 aa20.6■□□□□ 0.89
CPNE1-223ENST00000475146 SDR9C7Q8NEX9 313 aa20.6■□□□□ 0.89
CPNE1-223ENST00000475146 OR52E2Q8NGJ4 325 aa20.6■□□□□ 0.89
CPNE1-223ENST00000475146 ABHD4Q8TB40 342 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms