RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 COL7A1Q02388 2944 aa4.88□□□□□ -1.63
ITGB1-209ENST00000472147 NOTCH3Q9UM47 2321 aa4.88□□□□□ -1.63
ITGB1-209ENST00000472147 ISPDA4D126 451 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 TMEM247A6NEH6 219 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 A8MXK9 166 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 TMEM233B4DJY2 109 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 H3BSA7 217 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 PLPP3O14495 311 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 SURF4O15260 269 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 TM9SF1O15321 606 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 HOXA3O43365 443 aaPredicted RBP4.87□□□□□ -1.63
ITGB1-209ENST00000472147 SEC14L2O76054 403 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 LY86O95711 162 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 IGHV1-46P01743 117 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 CHRNGP07510 517 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 MYZAPP0CAP1 466 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 PRG2P13727 222 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 NQO1P15559 274 aaKnown RBP4.87□□□□□ -1.63
ITGB1-209ENST00000472147 TNFRSF1AP19438 455 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 TNFSF4P23510 183 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 AHCYP23526 432 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 ALDH3A1P30838 453 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 MTNR1BP49286 362 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 CRISP3P54108 245 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 RAG2P55895 527 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 SRSF4Q08170 494 aaKnown RBP4.87□□□□□ -1.63
ITGB1-209ENST00000472147 CHI3L2Q15782 390 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 WHAMMP3Q1A5X7 153 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 ALKBH6Q3KRA9 238 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 ESCO2Q56NI9 601 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 TOR2AQ5JU69 321 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 KPRPQ5T749 579 aaPredicted RBP4.87□□□□□ -1.63
ITGB1-209ENST00000472147 MBNL2Q5VZF2 373 aaKnown RBP4.87□□□□□ -1.63
ITGB1-209ENST00000472147 CARD17Q5XLA6 110 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 FAM91A1Q658Y4 838 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 ARL9Q6T311 187 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 ZER1Q7Z7L7 766 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 VRK2Q86Y07 508 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 KIRREL3Q8IZU9 778 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 MIER2Q8N344 545 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 TBC1D15Q8TC07 691 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 TSPEARQ8WU66 669 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 SLC38A5Q8WUX1 472 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 RAB40AQ8WXH6 277 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 DYRK2Q92630 601 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 TMEM54Q969K7 222 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 NEIL1Q96FI4 390 aaPredicted RBP4.87□□□□□ -1.63
ITGB1-209ENST00000472147 SLC47A1Q96FL8 570 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 THOC1Q96FV9 657 aaKnown RBP4.87□□□□□ -1.63
ITGB1-209ENST00000472147 MARS2Q96GW9 593 aaKnown RBP4.87□□□□□ -1.63
ITGB1-209ENST00000472147 SLC25A44Q96H78 314 aaPredicted RBP4.87□□□□□ -1.63
ITGB1-209ENST00000472147 PLEKHA8Q96JA3 519 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 PANX1Q96RD7 426 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 EMC6Q9BV81 110 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 ULBP2Q9BZM5 246 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 KCNN2Q9H2S1 579 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 SIAEQ9HAT2 523 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 TCF7L1Q9HCS4 588 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 BCL2L10Q9HD36 194 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 MRPL39Q9NYK5 338 aaKnown RBP4.87□□□□□ -1.63
ITGB1-209ENST00000472147 GLTPQ9NZD2 209 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 C1RLQ9NZP8 487 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 SELENONQ9NZV5 590 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 CACNG2Q9Y698 323 aa4.87□□□□□ -1.63
ITGB1-209ENST00000472147 CENPBD1B2RD01 187 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 DHHO43323 396 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 SPRY3O43610 288 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 OR6A2O95222 327 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 GPANK1O95872 356 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 HPRP00739 348 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 MT-ATP6P00846 226 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 IGHV2-70P01814 119 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 IL6P05231 212 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 LIPFP07098 398 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 PATE4P0C8F1 98 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 ZCCHC18P0CG32 403 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 HLA-DOBP13765 273 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 B4GALT1P15291 398 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 MAKP20794 623 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 STOMP27105 288 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 APLNRP35414 380 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 MDH2P40926 338 aaKnown RBP4.86□□□□□ -1.63
ITGB1-209ENST00000472147 CSNK1A1P48729 337 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 PAX2Q02962 417 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 PUDPQ08623 228 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 PCLAFQ15004 111 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 MAPK11Q15759 364 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 THEM4Q5T1C6 240 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 SLC27A4Q6P1M0 643 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 FIP1L1Q6UN15 594 aaKnown RBP4.86□□□□□ -1.63
ITGB1-209ENST00000472147 WDR88Q6ZMY6 472 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 ZNF836Q6ZNA1 936 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 SLC16A14Q7RTX9 510 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 SERPINA11Q86U17 422 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 PTOV1Q86YD1 416 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 MUC20Q8N307 709 aaPredicted RBP4.86□□□□□ -1.63
ITGB1-209ENST00000472147 PARP8Q8N3A8 854 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 PAQR4Q8N4S7 273 aaPredicted RBP4.86□□□□□ -1.63
ITGB1-209ENST00000472147 ZNF283Q8N7M2 679 aa4.86□□□□□ -1.63
ITGB1-209ENST00000472147 OR10S1Q8NGN2 331 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms