RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 CPSF4O95639 269 aaKnown RBP8.4□□□□□ -1.06
CDHR3-209ENST00000472116 CHRM2P08172 466 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 RPS4Y1P22090 263 aaKnown RBP8.4□□□□□ -1.06
CDHR3-209ENST00000472116 C2orf54Q08AI8 447 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 PSG7Q13046 419 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 LY6EQ16553 131 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 SYPL1Q16563 259 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 LYPD2Q6UXB3 125 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 ZNF836Q6ZNA1 936 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 VMO1Q7Z5L0 202 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 PXKQ7Z7A4 578 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 ALDH16A1Q8IZ83 802 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 KRTCAP2Q8N6L1 136 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 C10orf53Q8N6V4 93 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 OR52P1PQ8NH57 321 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 PPP1R35Q8TAP8 253 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 FBXO25Q8TCJ0 367 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 C10orf82Q8WW14 230 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 TMEM54Q969K7 222 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 POM121L2Q96KW2 1035 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 NKX3-1Q99801 234 aaPredicted RBP8.4□□□□□ -1.06
CDHR3-209ENST00000472116 TBCCD1Q9NVR7 557 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 MKS1Q9NXB0 559 aa8.4□□□□□ -1.06
CDHR3-209ENST00000472116 ADARB2-AS1A8MUL3 147 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 J3QL48 77 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 HMGN4O00479 90 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 RNASET2O00584 256 aaKnown RBP8.39□□□□□ -1.07
CDHR3-209ENST00000472116 NPFFO15130 113 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 SNRPAP09012 282 aaKnown RBP8.39□□□□□ -1.07
CDHR3-209ENST00000472116 TUBG1P23258 451 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 ZNF181Q2M3W8 571 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 ZFAND6Q6FIF0 208 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 OR4F3Q6IEY1 312 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 RNF165Q6ZSG1 346 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 CMTM4Q8IZR5 234 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 OR11L1Q8NGX0 322 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 C8orf46Q8TAG6 207 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 SLC7A13Q8TCU3 470 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 ASCL2Q99929 193 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 C1orf50Q9BV19 199 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 RAB17Q9H0T7 212 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 C12orf10Q9HB07 376 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 TUBG2Q9NRH3 451 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 SELENONQ9NZV5 590 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 ZNF180Q9UJW8 692 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 NDRG4Q9ULP0 352 aaKnown RBP8.39□□□□□ -1.07
CDHR3-209ENST00000472116 ZNF232Q9UNY5 417 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 KPTNQ9Y664 436 aa8.39□□□□□ -1.07
CDHR3-209ENST00000472116 HYDINQ4G0P3 5121 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 MEIOCA2RUB1 952 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 C11orf98E9PRG8 122 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 PEX11AO75192 247 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 ABHD16AO95870 558 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 ECDO95905 644 aaPredicted RBP8.38□□□□□ -1.07
CDHR3-209ENST00000472116 MMP7P09237 267 aaPredicted RBP8.38□□□□□ -1.07
CDHR3-209ENST00000472116 QDPRP09417 244 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 ADORA3P0DMS8 318 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 PRG2P13727 222 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 ZNF26P17031 533 aaPredicted RBP8.38□□□□□ -1.07
CDHR3-209ENST00000472116 PSMB10P40306 273 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 CLRN1P58418 232 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 TXNL4AP83876 142 aaKnown RBP8.38□□□□□ -1.07
CDHR3-209ENST00000472116 CDONQ4KMG0 1287 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 FAM201AQ5SY85 155 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 CEP85LQ5SZL2 805 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 RNF220Q5VTB9 566 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 IL23RQ5VWK5 629 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 ADAMTSL5Q6ZMM2 481 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 WDR88Q6ZMY6 472 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 ZNF841Q6ZN19 808 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 Q6ZR03 302 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 SLC35D2Q76EJ3 337 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 IGFN1Q86VF2 1251 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 MOGAT3Q86VF5 341 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 COMTD1Q86VU5 262 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 NUDCD3Q8IVD9 361 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 LRRC34Q8IZ02 419 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 FNDC5Q8NAU1 212 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 OR51G2Q8NGK0 314 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 OR6X1Q8NH79 312 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 AKR7LQ8NHP1 331 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 TUBGCP3Q96CW5 907 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 SLC41A3Q96GZ6 507 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 SLC25A44Q96H78 314 aaPredicted RBP8.38□□□□□ -1.07
CDHR3-209ENST00000472116 MEGF10Q96KG7 1140 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 C4orf45Q96LM5 186 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 SSX3Q99909 188 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 SLC35A5Q9BS91 424 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 MCRIP2Q9BUT9 160 aaKnown RBP8.38□□□□□ -1.07
CDHR3-209ENST00000472116 TNFRSF12AQ9NP84 129 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 MRPL39Q9NYK5 338 aaKnown RBP8.38□□□□□ -1.07
CDHR3-209ENST00000472116 CALML5Q9NZT1 146 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 KLHL14Q9P2G3 628 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 SLC17A7Q9P2U7 560 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 ONECUT1Q9UBC0 465 aa8.38□□□□□ -1.07
CDHR3-209ENST00000472116 ZNF443Q9Y2A4 671 aaPredicted RBP8.38□□□□□ -1.07
CDHR3-209ENST00000472116 LOC100509620A0A075B734 347 aa8.37□□□□□ -1.07
CDHR3-209ENST00000472116 A0A1W2PRD5 423 aa8.37□□□□□ -1.07
CDHR3-209ENST00000472116 A0A1W2PRF3 423 aa8.37□□□□□ -1.07
CDHR3-209ENST00000472116 A0A1W2PRM7 423 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms