RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 PRB3Q04118 309 aaPredicted RBP5.72□□□□□ -1.49
HDAC1-204ENST00000471488 CD47Q08722 323 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 PSG7Q13046 419 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 HERPUD1Q15011 391 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 OR1Q1Q15612 314 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 MAPK11Q15759 364 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 DPY19L1Q2PZI1 675 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 GTDC1Q4AE62 458 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 KPRPQ5T749 579 aaPredicted RBP5.72□□□□□ -1.49
HDAC1-204ENST00000471488 FAM91A1Q658Y4 838 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 ZNF774Q6NX45 483 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 LYPD2Q6UXB3 125 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 C1orf122Q6ZSJ8 110 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 NANOGNBQ7Z5D8 188 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 MOGAT3Q86VF5 341 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 ALDH16A1Q8IZ83 802 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 FITM2Q8N6M3 262 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 ZNF781Q8N8C0 355 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 ZSCAN4Q8NAM6 433 aaPredicted RBP5.72□□□□□ -1.49
HDAC1-204ENST00000471488 PHF21AQ96BD5 680 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 TESCQ96BS2 214 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 CMBLQ96DG6 245 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 APOPT1Q96IL0 206 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 POM121L2Q96KW2 1035 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 C4orf45Q96LM5 186 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 TEX37Q96LM6 180 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 SIGLEC11Q96RL6 698 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 RHOXF2Q9BQY4 288 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 POFUT1Q9H488 388 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 PRDM13Q9H4Q3 707 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 TMEM165Q9HC07 324 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 GCM1Q9NP62 436 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 CGGBP1Q9UFW8 167 aaPredicted RBP5.72□□□□□ -1.49
HDAC1-204ENST00000471488 IL19Q9UHD0 177 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 CHST2Q9Y4C5 530 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 TANC2Q9HCD6 1990 aa5.72□□□□□ -1.49
HDAC1-204ENST00000471488 IGHV1-69DA0A0B4J2H0 117 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 A0A1W2PRG6 482 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 CPSF4LA6NMK7 179 aaKnown RBP5.71□□□□□ -1.5
HDAC1-204ENST00000471488 C22orf46C9J442 243 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 TNFRSF13BO14836 293 aaPredicted RBP5.71□□□□□ -1.5
HDAC1-204ENST00000471488 ITM2AO43736 263 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 RRP9O43818 475 aaKnown RBP5.71□□□□□ -1.5
HDAC1-204ENST00000471488 XPNPEP2O43895 674 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 PAHP00439 452 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 IGHV1-69P01742 117 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 MMP7P09237 267 aaPredicted RBP5.71□□□□□ -1.5
HDAC1-204ENST00000471488 PGA4P0DJD7 388 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 PGA3P0DJD8 388 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 LBPP18428 481 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 FUT4P22083 530 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 AQP1P29972 269 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 CDH12P55289 794 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 BPIFB3P59826 476 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 RPL15P61313 204 aaKnown RBP5.71□□□□□ -1.5
HDAC1-204ENST00000471488 ARF6P62330 175 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 PSG4Q00888 419 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 PAX2Q02962 417 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 FMODQ06828 376 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 CDK5R2Q13319 367 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 TOP3AQ13472 1001 aaPredicted RBP5.71□□□□□ -1.5
HDAC1-204ENST00000471488 LY6EQ16553 131 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 FOXB2Q5VYV0 432 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 NXNQ6DKJ4 435 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 SLC35E4Q6ICL7 350 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 TTC33Q6PID6 262 aaPredicted RBP5.71□□□□□ -1.5
HDAC1-204ENST00000471488 Q6ZR03 302 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 ZNF572Q7Z3I7 529 aaPredicted RBP5.71□□□□□ -1.5
HDAC1-204ENST00000471488 PTOV1Q86YD1 416 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 IFT20Q8IY31 132 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 KLHDC1Q8N7A1 406 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 BHLHE23Q8NDY6 225 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 NOXO1Q8NFA2 376 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 OR4S1Q8NGB4 309 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 NFKBIDQ8NI38 313 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 TCP10LQ8TDR4 215 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 R3HDM4Q96D70 268 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 SLC41A3Q96GZ6 507 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 MAGEB18Q96M61 343 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 WWC2-AS2Q96NR7 200 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 WDFY2Q96P53 400 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 NKX3-1Q99801 234 aaPredicted RBP5.71□□□□□ -1.5
HDAC1-204ENST00000471488 TPT1P8Q9HAU6 139 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 C12orf10Q9HB07 376 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 NANSQ9NR45 359 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 MAN2C1Q9NTJ4 1040 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 UFSP2Q9NUQ7 469 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 ASIC5Q9NY37 505 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 PTTG3PQ9NZH4 202 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 ONECUT1Q9UBC0 465 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 PCDHGB5Q9Y5G0 923 aa5.71□□□□□ -1.5
HDAC1-204ENST00000471488 A0A1W2PRX2 142 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 ZNF879B4DU55 563 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 F5H5P2 479 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 GPR37O15354 613 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 PLXNB1O43157 2135 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 TPST1O60507 370 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 FMO6PO60774 539 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 PEX14O75381 377 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 MT-ATP6P00846 226 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms