RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 SYS1Q8N2H4 156 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 LILRB2Q8N423 598 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 CYB561A3Q8NBI2 242 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 CCDC74AQ96AQ1 378 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 PRSS27Q9BQR3 290 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 CCDC86Q9H6F5 360 aaKnown RBP12.55□□□□□ -0.4
GPC1-208ENST00000469694 SEBOXQ9HB31 216 aaPredicted RBP12.55□□□□□ -0.4
GPC1-208ENST00000469694 CUTCQ9NTM9 273 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 ZNF223Q9UK11 482 aaPredicted RBP12.55□□□□□ -0.4
GPC1-208ENST00000469694 FREM2Q5SZK8 3169 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 OR6C76A6NM76 312 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 PATE3B3GLJ2 98 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 GLSO94925 669 aaPredicted RBP12.55□□□□□ -0.4
GPC1-208ENST00000469694 FOLR2P14207 255 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 ARRB1P49407 418 aaPredicted RBP12.55□□□□□ -0.4
GPC1-208ENST00000469694 EFNA3P52797 238 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 RAB5BP61020 215 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 EEF1A1P68104 462 aaKnown RBP12.55□□□□□ -0.4
GPC1-208ENST00000469694 HSD11B2P80365 405 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 SRSF3P84103 164 aaKnown RBP12.55□□□□□ -0.4
GPC1-208ENST00000469694 WDR88Q6ZMY6 472 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 ZNF813Q6ZN06 617 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 ALX4Q9H161 411 aaPredicted RBP12.55□□□□□ -0.4
GPC1-208ENST00000469694 DUSP22Q9NRW4 184 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 PMS2P1A4D2B8 440 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 ACOD1A6NK06 481 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 EFCAB7A8K855 629 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 H3BMH7 237 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 UBE2CO00762 179 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 DUX1O43812 170 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 RCBTB2O95199 551 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 TMIGD3P0DMS9 266 aaPredicted RBP12.54□□□□□ -0.4
GPC1-208ENST00000469694 EDNRAP25101 427 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 MAP3K8P41279 467 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 ZNF136P52737 540 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 POU4F2Q12837 409 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 VWA2Q5GFL6 755 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 EXOSC6Q5RKV6 272 aaKnown RBP12.54□□□□□ -0.4
GPC1-208ENST00000469694 RAB12Q6IQ22 244 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 GUSBP11Q6P575 273 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 DBX2Q6ZNG2 339 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 SHISA6Q6ZSJ9 500 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 ZNF619Q8N2I2 560 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 OR51S1Q8NGJ8 323 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 TSLPQ969D9 159 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 DGAT2Q96PD7 388 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 TAS2R8Q9NYW2 309 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 MRPS33Q9Y291 106 aaKnown RBP12.54□□□□□ -0.4
GPC1-208ENST00000469694 ASCC3Q8N3C0 2202 aaKnown RBP12.54□□□□□ -0.4
GPC1-208ENST00000469694 TECTAO75443 2155 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 RIIAD1A6NNX1 92 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 COLCA2A8K830 154 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 CLDN4O14493 209 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 TO15178 435 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 FGF16O43320 207 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 HTR3BO95264 441 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 AGR2O95994 175 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 CBR1P16152 277 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 ABOP16442 354 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 PNLIPRP2P54317 469 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 ACTA2P62736 377 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 ACTG2P63267 376 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 BEX5Q5H9J7 111 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 NPSR1Q6W5P4 371 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 PHOSPHO1Q8TCT1 267 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 PTCHD1Q96NR3 888 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 C1orf198Q9H425 327 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 RNF122Q9H9V4 155 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 ZNF337Q9Y3M9 751 aa12.54□□□□□ -0.4
GPC1-208ENST00000469694 TRBV23-1A0A0A0MS06 115 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 RNF222A6NCQ9 220 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 IMPA2O14732 288 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 CFIP05156 583 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 CSF1P09603 554 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 SLC25A4P12235 298 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 NFYBP25208 207 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 ITPKBP27987 946 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 MAGEB1P43366 347 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 C11orf87Q6NUJ2 197 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 PLXDC1Q8IUK5 500 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 MISPQ8IVT2 679 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 ZNF595Q8IYB9 648 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 C16orf52Q8NHV5 167 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 CNTNAP3BQ96NU0 1288 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 SEC11CQ9BY50 192 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 EXO5Q9H790 373 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 PNO1Q9NRX1 252 aaKnown RBP12.53□□□□□ -0.4
GPC1-208ENST00000469694 GPR179Q6PRD1 2367 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 GPRIN2O60269 458 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 BRINP1O60477 761 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 ICOSLGO75144 302 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 LPAL2Q16609 132 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 PMS2CLQ68D20 193 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 RPL13AP3Q6NVV1 102 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 ACOT7LQ6ZUV0 252 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 JAZF1Q86VZ6 243 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 OR1J4Q8NGS1 313 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 OR4C6Q8NH72 309 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 VSTM2LQ96N03 204 aa12.53□□□□□ -0.4
GPC1-208ENST00000469694 MESP1Q9BRJ9 268 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms